RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
KNL1-208ENST00000532056 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
KNL1-208ENST00000532056 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
KNL1-208ENST00000532056 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
KNL1-208ENST00000532056 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
KNL1-208ENST00000532056 ROMO1P60602 79 aa3.62□□□□□ -1.83
KNL1-208ENST00000532056 MT1GP13640 62 aa3.6□□□□□ -1.83
KNL1-208ENST00000532056 MT1LQ93083 61 aa3.6□□□□□ -1.83
KNL1-208ENST00000532056 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
KNL1-208ENST00000532056 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
KNL1-208ENST00000532056 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
KNL1-208ENST00000532056 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
KNL1-208ENST00000532056 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
KNL1-208ENST00000532056 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
KNL1-208ENST00000532056 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
KNL1-208ENST00000532056 MT1MQ8N339 61 aa3.54□□□□□ -1.84
KNL1-208ENST00000532056 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
KNL1-208ENST00000532056 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
KNL1-208ENST00000532056 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
KNL1-208ENST00000532056 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
KNL1-208ENST00000532056 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
KNL1-208ENST00000532056 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
KNL1-208ENST00000532056 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
KNL1-208ENST00000532056 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
KNL1-208ENST00000532056 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
KNL1-208ENST00000532056 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
KNL1-208ENST00000532056 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
KNL1-208ENST00000532056 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
KNL1-208ENST00000532056 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
KNL1-208ENST00000532056 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
KNL1-208ENST00000532056 MT4P47944 62 aa3.2□□□□□ -1.9
KNL1-208ENST00000532056 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
KNL1-208ENST00000532056 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
KNL1-208ENST00000532056 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
KNL1-208ENST00000532056 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
KNL1-208ENST00000532056 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
KNL1-208ENST00000532056 MT1AP04731 61 aa3.07□□□□□ -1.92
KNL1-208ENST00000532056 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
KNL1-208ENST00000532056 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
KNL1-208ENST00000532056 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
KNL1-208ENST00000532056 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
KNL1-208ENST00000532056 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
KNL1-208ENST00000532056 H3BS24 57 aa2.95□□□□□ -1.94
KNL1-208ENST00000532056 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
KNL1-208ENST00000532056 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
KNL1-208ENST00000532056 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
KNL1-208ENST00000532056 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
KNL1-208ENST00000532056 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
KNL1-208ENST00000532056 MT3P25713 68 aa2.79□□□□□ -1.96
KNL1-208ENST00000532056 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
KNL1-208ENST00000532056 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
KNL1-208ENST00000532056 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
KNL1-208ENST00000532056 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
KNL1-208ENST00000532056 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
KNL1-208ENST00000532056 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
KNL1-208ENST00000532056 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
KNL1-208ENST00000532056 MUC5ACP98088 5654 aa2.57□□□□□ -2
KNL1-208ENST00000532056 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
KNL1-208ENST00000532056 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
KNL1-208ENST00000532056 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
KNL1-208ENST00000532056 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
KNL1-208ENST00000532056 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
KNL1-208ENST00000532056 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
KNL1-208ENST00000532056 INE1O15225 51 aa2.42□□□□□ -2.02
KNL1-208ENST00000532056 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
KNL1-208ENST00000532056 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
KNL1-208ENST00000532056 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
KNL1-208ENST00000532056 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
KNL1-208ENST00000532056 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
KNL1-208ENST00000532056 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
KNL1-208ENST00000532056 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
KNL1-208ENST00000532056 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
KNL1-208ENST00000532056 PRM1P04553 51 aa1.86□□□□□ -2.11
KNL1-208ENST00000532056 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
KNL1-208ENST00000532056 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
KNL1-208ENST00000532056 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
KNL1-208ENST00000532056 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
KNL1-208ENST00000532056 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 78.2 ms