RNA–Protein interactions for RNA: ENST00000531478.5

ABCA7-215, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 725 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-215ENST00000531478 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
ABCA7-215ENST00000531478 LCE5AQ5TCM9 118 aa7.32□□□□□ -1.24
ABCA7-215ENST00000531478 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
ABCA7-215ENST00000531478 MT1GP13640 62 aa7.19□□□□□ -1.26
ABCA7-215ENST00000531478 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
ABCA7-215ENST00000531478 MT1LQ93083 61 aa7.16□□□□□ -1.26
ABCA7-215ENST00000531478 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
ABCA7-215ENST00000531478 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
ABCA7-215ENST00000531478 DSTQ03001 7570 aaKnown RBP7.06□□□□□ -1.28
ABCA7-215ENST00000531478 MT1MQ8N339 61 aa7.06□□□□□ -1.28
ABCA7-215ENST00000531478 ROMO1P60602 79 aa7□□□□□ -1.29
ABCA7-215ENST00000531478 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
ABCA7-215ENST00000531478 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
ABCA7-215ENST00000531478 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
ABCA7-215ENST00000531478 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
ABCA7-215ENST00000531478 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
ABCA7-215ENST00000531478 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
ABCA7-215ENST00000531478 MT4P47944 62 aa6.79□□□□□ -1.32
ABCA7-215ENST00000531478 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
ABCA7-215ENST00000531478 BRK1Q8WUW1 75 aa6.71□□□□□ -1.34
ABCA7-215ENST00000531478 GPR98Q8WXG9 6306 aa6.67□□□□□ -1.34
ABCA7-215ENST00000531478 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
ABCA7-215ENST00000531478 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
ABCA7-215ENST00000531478 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
ABCA7-215ENST00000531478 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
ABCA7-215ENST00000531478 HMCN1Q96RW7 5635 aa6.54□□□□□ -1.36
ABCA7-215ENST00000531478 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
ABCA7-215ENST00000531478 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
ABCA7-215ENST00000531478 KRTAP12-4P60329 112 aa6.35□□□□□ -1.39
ABCA7-215ENST00000531478 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
ABCA7-215ENST00000531478 AHNAK2Q8IVF2 5795 aa6.31□□□□□ -1.4
ABCA7-215ENST00000531478 KRTAP20-2Q3LI61 65 aa6.31□□□□□ -1.4
ABCA7-215ENST00000531478 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
ABCA7-215ENST00000531478 KRTAP5-10Q6L8G5 202 aa6.29□□□□□ -1.4
ABCA7-215ENST00000531478 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
ABCA7-215ENST00000531478 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
ABCA7-215ENST00000531478 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
ABCA7-215ENST00000531478 MT1AP04731 61 aa6.08□□□□□ -1.44
ABCA7-215ENST00000531478 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
ABCA7-215ENST00000531478 PRO0628Q9UI54 55 aa6.08□□□□□ -1.44
ABCA7-215ENST00000531478 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
ABCA7-215ENST00000531478 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
ABCA7-215ENST00000531478 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
ABCA7-215ENST00000531478 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
ABCA7-215ENST00000531478 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
ABCA7-215ENST00000531478 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
ABCA7-215ENST00000531478 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
ABCA7-215ENST00000531478 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
ABCA7-215ENST00000531478 MT3P25713 68 aa5.55□□□□□ -1.52
ABCA7-215ENST00000531478 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
ABCA7-215ENST00000531478 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
ABCA7-215ENST00000531478 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
ABCA7-215ENST00000531478 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
ABCA7-215ENST00000531478 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
ABCA7-215ENST00000531478 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
ABCA7-215ENST00000531478 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
ABCA7-215ENST00000531478 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
ABCA7-215ENST00000531478 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
ABCA7-215ENST00000531478 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
ABCA7-215ENST00000531478 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
ABCA7-215ENST00000531478 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
ABCA7-215ENST00000531478 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
ABCA7-215ENST00000531478 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
ABCA7-215ENST00000531478 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
ABCA7-215ENST00000531478 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
ABCA7-215ENST00000531478 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
ABCA7-215ENST00000531478 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
ABCA7-215ENST00000531478 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
ABCA7-215ENST00000531478 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
ABCA7-215ENST00000531478 H3BS24 57 aa3.74□□□□□ -1.81
ABCA7-215ENST00000531478 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
ABCA7-215ENST00000531478 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
ABCA7-215ENST00000531478 PRM1P04553 51 aa3.62□□□□□ -1.83
ABCA7-215ENST00000531478 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
ABCA7-215ENST00000531478 INE1O15225 51 aa3.47□□□□□ -1.85
ABCA7-215ENST00000531478 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
ABCA7-215ENST00000531478 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
ABCA7-215ENST00000531478 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 15.4 ms