RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	LINC01558	Q9Y6Z2	57 aa		4.8	□□□□□ -1.64
ABCA7-214	ENST00000531467		A0A0A0MQY5	61 aa		4.78	□□□□□ -1.64
ABCA7-214	ENST00000531467	C10orf95	Q9H7T3	257 aa		4.78	□□□□□ -1.64
ABCA7-214	ENST00000531467	TMEM258	P61165	79 aa		4.77	□□□□□ -1.65
ABCA7-214	ENST00000531467	TNP1	P09430	55 aa		4.76	□□□□□ -1.65
ABCA7-214	ENST00000531467	MT1G	P13640	62 aa		4.76	□□□□□ -1.65
ABCA7-214	ENST00000531467	LCE3A	Q5TA76	89 aa		4.73	□□□□□ -1.65
ABCA7-214	ENST00000531467	KRTAP5-7	Q6L8G8	165 aa		4.72	□□□□□ -1.65
ABCA7-214	ENST00000531467	PP632	Q6XCG6	107 aa		4.72	□□□□□ -1.65
ABCA7-214	ENST00000531467	MT1L	Q93083	61 aa		4.7	□□□□□ -1.66
ABCA7-214	ENST00000531467	KRTAP4-6	Q9BYQ5	205 aa		4.7	□□□□□ -1.66
ABCA7-214	ENST00000531467		V9GYY9	64 aa		4.7	□□□□□ -1.66
ABCA7-214	ENST00000531467	UQCR11	O14957	56 aa		4.68	□□□□□ -1.66
ABCA7-214	ENST00000531467	KRTAP5-4	Q6L8H1	288 aa		4.68	□□□□□ -1.66
ABCA7-214	ENST00000531467	MT1M	Q8N339	61 aa		4.68	□□□□□ -1.66
ABCA7-214	ENST00000531467	KRTAP5-3	Q6L8H2	238 aa		4.64	□□□□□ -1.67
ABCA7-214	ENST00000531467	SPRR5	A0A1B0GTR4	108 aa		4.58	□□□□□ -1.68
ABCA7-214	ENST00000531467	MIR22HG	Q0VDD5	57 aa		4.58	□□□□□ -1.68
ABCA7-214	ENST00000531467	KRTAP4-3	Q9BYR4	195 aa		4.58	□□□□□ -1.68
ABCA7-214	ENST00000531467	KRTAP12-3	P60328	96 aa		4.56	□□□□□ -1.68
ABCA7-214	ENST00000531467	KRTAP25-1	Q3LHN0	102 aa		4.5	□□□□□ -1.69
ABCA7-214	ENST00000531467		K7ERS5	55 aa		4.49	□□□□□ -1.69
ABCA7-214	ENST00000531467	PSPHP1	O15172	72 aa		4.49	□□□□□ -1.69
ABCA7-214	ENST00000531467		Q1T7F1	81 aa		4.48	□□□□□ -1.69
ABCA7-214	ENST00000531467	KRTAP4-7	Q9BYR0	210 aa		4.47	□□□□□ -1.69
ABCA7-214	ENST00000531467	KRTAP20-2	Q3LI61	65 aa		4.46	□□□□□ -1.7
ABCA7-214	ENST00000531467	PRO0628	Q9UI54	55 aa		4.38	□□□□□ -1.71
ABCA7-214	ENST00000531467	KRTAP23-1	A1A580	65 aa		4.34	□□□□□ -1.71
ABCA7-214	ENST00000531467		A6NED7	52 aa		4.34	□□□□□ -1.71
ABCA7-214	ENST00000531467	KRTAP12-4	P60329	112 aa		4.31	□□□□□ -1.72
ABCA7-214	ENST00000531467	KRTAP19-4	Q3LI73	84 aa		4.3	□□□□□ -1.72
ABCA7-214	ENST00000531467	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.3	□□□□□ -1.72
ABCA7-214	ENST00000531467	KRTAP15-1	Q3LI76	137 aa		4.26	□□□□□ -1.73
ABCA7-214	ENST00000531467	CDC42SE1	Q9NRR8	79 aa		4.25	□□□□□ -1.73
ABCA7-214	ENST00000531467	RPS28	P62857	69 aa	Known RBP	4.24	□□□□□ -1.73
ABCA7-214	ENST00000531467	LOC100996750	A0A140TA64	210 aa		4.23	□□□□□ -1.73
ABCA7-214	ENST00000531467	PMAIP1	Q13794	54 aa		4.21	□□□□□ -1.74
ABCA7-214	ENST00000531467	ROMO1	P60602	79 aa		4.19	□□□□□ -1.74
ABCA7-214	ENST00000531467	LCE3C	Q5T5A8	94 aa		4.19	□□□□□ -1.74
ABCA7-214	ENST00000531467	KRTAP4-11	Q9BYQ6	195 aa		4.18	□□□□□ -1.74
ABCA7-214	ENST00000531467	SYNE1	Q8NF91	8797 aa	Known RBP	4.14	□□□□□ -1.75
ABCA7-214	ENST00000531467	MUC5AC	P98088	5654 aa		4.1	□□□□□ -1.75
ABCA7-214	ENST00000531467	AHNAK	Q09666	5890 aa	Known RBP	4.07	□□□□□ -1.76
ABCA7-214	ENST00000531467	KRTAP5-8	O75690	187 aa		4.06	□□□□□ -1.76
ABCA7-214	ENST00000531467	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.04	□□□□□ -1.76
ABCA7-214	ENST00000531467	KRTAP5-2	Q701N4	177 aa		4.02	□□□□□ -1.77
ABCA7-214	ENST00000531467	MT1A	P04731	61 aa		4	□□□□□ -1.77
ABCA7-214	ENST00000531467	PRAC1	Q96KF2	57 aa		3.98	□□□□□ -1.77
ABCA7-214	ENST00000531467	KRTAP6-1	Q3LI64	71 aa		3.97	□□□□□ -1.77
ABCA7-214	ENST00000531467	KRTAP9-6	A8MVA2	160 aa		3.96	□□□□□ -1.78
ABCA7-214	ENST00000531467	KRTAP9-9	Q9BYP9	154 aa		3.93	□□□□□ -1.78
ABCA7-214	ENST00000531467	KTN1-AS1	Q86SY8	53 aa		3.91	□□□□□ -1.78
ABCA7-214	ENST00000531467	OBSCN	Q5VST9	7968 aa		3.88	□□□□□ -1.79
ABCA7-214	ENST00000531467	KRTAP9-4	Q9BYQ2	154 aa		3.86	□□□□□ -1.79
ABCA7-214	ENST00000531467	BRK1	Q8WUW1	75 aa		3.85	□□□□□ -1.79
ABCA7-214	ENST00000531467	KRTAP6-2	Q3LI66	62 aa		3.8	□□□□□ -1.8
ABCA7-214	ENST00000531467	LUZP6	Q538Z0	58 aa		3.7	□□□□□ -1.82
ABCA7-214	ENST00000531467	KRTAP5-1	Q6L8H4	278 aa		3.69	□□□□□ -1.82
ABCA7-214	ENST00000531467	MT3	P25713	68 aa		3.66	□□□□□ -1.82
ABCA7-214	ENST00000531467	NDUFAF8	A1L188	74 aa		3.5	□□□□□ -1.85
ABCA7-214	ENST00000531467	LCE1E	Q5T753	118 aa		3.37	□□□□□ -1.87
ABCA7-214	ENST00000531467	LCE1B	Q5T7P3	118 aa		3.24	□□□□□ -1.89
ABCA7-214	ENST00000531467	KRTAP4-2	Q9BYR5	136 aa		3.23	□□□□□ -1.89
ABCA7-214	ENST00000531467	LCE1C	Q5T751	118 aa		3.13	□□□□□ -1.91
ABCA7-214	ENST00000531467	KRTAP4-12	Q9BQ66	201 aa		3.12	□□□□□ -1.91
ABCA7-214	ENST00000531467	LCE3D	Q9BYE3	92 aa		3.02	□□□□□ -1.93
ABCA7-214	ENST00000531467	KRTAP5-11	Q6L8G4	156 aa		2.93	□□□□□ -1.94
ABCA7-214	ENST00000531467	LCE1F	Q5T754	118 aa		2.89	□□□□□ -1.95
ABCA7-214	ENST00000531467	PHGR1	C9JFL3	82 aa		2.86	□□□□□ -1.95
ABCA7-214	ENST00000531467	INE1	O15225	51 aa		2.85	□□□□□ -1.95
ABCA7-214	ENST00000531467	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.85	□□□□□ -1.95
ABCA7-214	ENST00000531467	LCE3E	Q5T5B0	92 aa		2.84	□□□□□ -1.95
ABCA7-214	ENST00000531467	KRTAP21-2	Q3LI59	83 aa		2.62	□□□□□ -1.99
ABCA7-214	ENST00000531467	KRTAP4-4	Q9BYR3	166 aa		2.44	□□□□□ -2.02
ABCA7-214	ENST00000531467	MUC19	Q7Z5P9	8384 aa		2.41	□□□□□ -2.02
ABCA7-214	ENST00000531467	KRTAP21-1	Q3LI58	79 aa		2.17	□□□□□ -2.06
ABCA7-214	ENST00000531467	PRM1	P04553	51 aa		2.14	□□□□□ -2.07
ABCA7-214	ENST00000531467	MUC16	Q8WXI7	14507 aa		1.67	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms