RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 COA5Q86WW8 74 aa6.89□□□□□ -1.31
CHKA-206ENST00000531341 SYNE1Q8NF91 8797 aaKnown RBP6.88□□□□□ -1.31
CHKA-206ENST00000531341 TNP1P09430 55 aa6.86□□□□□ -1.31
CHKA-206ENST00000531341 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
CHKA-206ENST00000531341 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
CHKA-206ENST00000531341 A8MU10 97 aa6.79□□□□□ -1.32
CHKA-206ENST00000531341 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
CHKA-206ENST00000531341 SMIM26A0A096LP01 95 aa6.69□□□□□ -1.34
CHKA-206ENST00000531341 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
CHKA-206ENST00000531341 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
CHKA-206ENST00000531341 AHNAKQ09666 5890 aaKnown RBP6.54□□□□□ -1.36
CHKA-206ENST00000531341 MUC5BQ9HC84 5762 aaPredicted RBP6.53□□□□□ -1.36
CHKA-206ENST00000531341 A0A1B0GU69 56 aa6.52□□□□□ -1.37
CHKA-206ENST00000531341 MUC5ACP98088 5654 aa6.52□□□□□ -1.37
CHKA-206ENST00000531341 KRTAP5-2Q701N4 177 aa6.49□□□□□ -1.37
CHKA-206ENST00000531341 KRTAP5-8O75690 187 aa6.47□□□□□ -1.37
CHKA-206ENST00000531341 K7ERU9 68 aa6.43□□□□□ -1.38
CHKA-206ENST00000531341 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
CHKA-206ENST00000531341 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
CHKA-206ENST00000531341 H7BZZ5 65 aa6.34□□□□□ -1.39
CHKA-206ENST00000531341 MT1AP04731 61 aa6.28□□□□□ -1.4
CHKA-206ENST00000531341 COX7CP15954 63 aa6.25□□□□□ -1.41
CHKA-206ENST00000531341 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
CHKA-206ENST00000531341 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
CHKA-206ENST00000531341 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
CHKA-206ENST00000531341 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
CHKA-206ENST00000531341 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
CHKA-206ENST00000531341 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
CHKA-206ENST00000531341 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
CHKA-206ENST00000531341 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
CHKA-206ENST00000531341 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
CHKA-206ENST00000531341 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
CHKA-206ENST00000531341 KRTAP5-1Q6L8H4 278 aa5.95□□□□□ -1.46
CHKA-206ENST00000531341 UQCR11O14957 56 aa5.91□□□□□ -1.46
CHKA-206ENST00000531341 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
CHKA-206ENST00000531341 MT3P25713 68 aa5.76□□□□□ -1.49
CHKA-206ENST00000531341 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
CHKA-206ENST00000531341 CCDC179H3BU77 68 aa5.67□□□□□ -1.5
CHKA-206ENST00000531341 K7ERS5 55 aa5.66□□□□□ -1.5
CHKA-206ENST00000531341 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
CHKA-206ENST00000531341 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
CHKA-206ENST00000531341 RPS28P62857 69 aaKnown RBP5.44□□□□□ -1.54
CHKA-206ENST00000531341 LCE1EQ5T753 118 aa5.41□□□□□ -1.54
CHKA-206ENST00000531341 Q1T7F1 81 aa5.35□□□□□ -1.55
CHKA-206ENST00000531341 PSPHP1O15172 72 aa5.34□□□□□ -1.55
CHKA-206ENST00000531341 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
CHKA-206ENST00000531341 TMEM258P61165 79 aa5.29□□□□□ -1.56
CHKA-206ENST00000531341 ROMO1P60602 79 aa5.24□□□□□ -1.57
CHKA-206ENST00000531341 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
CHKA-206ENST00000531341 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
CHKA-206ENST00000531341 V9GYY9 64 aa5.1□□□□□ -1.59
CHKA-206ENST00000531341 A6NED7 52 aa5.06□□□□□ -1.6
CHKA-206ENST00000531341 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
CHKA-206ENST00000531341 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
CHKA-206ENST00000531341 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
CHKA-206ENST00000531341 H3BS24 57 aa4.91□□□□□ -1.62
CHKA-206ENST00000531341 PCP4P48539 62 aa4.75□□□□□ -1.65
CHKA-206ENST00000531341 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
CHKA-206ENST00000531341 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
CHKA-206ENST00000531341 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
CHKA-206ENST00000531341 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
CHKA-206ENST00000531341 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
CHKA-206ENST00000531341 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
CHKA-206ENST00000531341 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
CHKA-206ENST00000531341 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CHKA-206ENST00000531341 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
CHKA-206ENST00000531341 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
CHKA-206ENST00000531341 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
CHKA-206ENST00000531341 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
CHKA-206ENST00000531341 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
CHKA-206ENST00000531341 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
CHKA-206ENST00000531341 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
CHKA-206ENST00000531341 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
CHKA-206ENST00000531341 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
CHKA-206ENST00000531341 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
CHKA-206ENST00000531341 PRM1P04553 51 aa2.69□□□□□ -1.98
CHKA-206ENST00000531341 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
CHKA-206ENST00000531341 INE1O15225 51 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms