RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
PTPN11-204ENST00000531326 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
PTPN11-204ENST00000531326 MT1EP04732 61 aa6.64□□□□□ -1.35
PTPN11-204ENST00000531326 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
PTPN11-204ENST00000531326 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
PTPN11-204ENST00000531326 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
PTPN11-204ENST00000531326 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
PTPN11-204ENST00000531326 LCE1DQ5T752 114 aa6.51□□□□□ -1.37
PTPN11-204ENST00000531326 MT1GP13640 62 aa6.43□□□□□ -1.38
PTPN11-204ENST00000531326 ROMO1P60602 79 aa6.41□□□□□ -1.38
PTPN11-204ENST00000531326 HMCN1Q96RW7 5635 aa6.4□□□□□ -1.38
PTPN11-204ENST00000531326 MT4P47944 62 aa6.38□□□□□ -1.39
PTPN11-204ENST00000531326 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
PTPN11-204ENST00000531326 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
PTPN11-204ENST00000531326 MT1MQ8N339 61 aa6.35□□□□□ -1.39
PTPN11-204ENST00000531326 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
PTPN11-204ENST00000531326 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
PTPN11-204ENST00000531326 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
PTPN11-204ENST00000531326 MT1LQ93083 61 aa6.31□□□□□ -1.4
PTPN11-204ENST00000531326 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
PTPN11-204ENST00000531326 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
PTPN11-204ENST00000531326 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
PTPN11-204ENST00000531326 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
PTPN11-204ENST00000531326 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
PTPN11-204ENST00000531326 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
PTPN11-204ENST00000531326 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
PTPN11-204ENST00000531326 KRTAP5-7Q6L8G8 165 aa6□□□□□ -1.45
PTPN11-204ENST00000531326 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
PTPN11-204ENST00000531326 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
PTPN11-204ENST00000531326 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
PTPN11-204ENST00000531326 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
PTPN11-204ENST00000531326 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
PTPN11-204ENST00000531326 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
PTPN11-204ENST00000531326 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
PTPN11-204ENST00000531326 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
PTPN11-204ENST00000531326 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
PTPN11-204ENST00000531326 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
PTPN11-204ENST00000531326 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
PTPN11-204ENST00000531326 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
PTPN11-204ENST00000531326 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
PTPN11-204ENST00000531326 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
PTPN11-204ENST00000531326 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
PTPN11-204ENST00000531326 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
PTPN11-204ENST00000531326 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
PTPN11-204ENST00000531326 MT1AP04731 61 aa5.37□□□□□ -1.55
PTPN11-204ENST00000531326 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
PTPN11-204ENST00000531326 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
PTPN11-204ENST00000531326 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
PTPN11-204ENST00000531326 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
PTPN11-204ENST00000531326 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
PTPN11-204ENST00000531326 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
PTPN11-204ENST00000531326 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
PTPN11-204ENST00000531326 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
PTPN11-204ENST00000531326 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
PTPN11-204ENST00000531326 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
PTPN11-204ENST00000531326 MT3P25713 68 aa4.88□□□□□ -1.63
PTPN11-204ENST00000531326 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
PTPN11-204ENST00000531326 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
PTPN11-204ENST00000531326 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
PTPN11-204ENST00000531326 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
PTPN11-204ENST00000531326 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
PTPN11-204ENST00000531326 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
PTPN11-204ENST00000531326 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
PTPN11-204ENST00000531326 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
PTPN11-204ENST00000531326 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
PTPN11-204ENST00000531326 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
PTPN11-204ENST00000531326 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
PTPN11-204ENST00000531326 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
PTPN11-204ENST00000531326 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
PTPN11-204ENST00000531326 H3BS24 57 aa3.71□□□□□ -1.82
PTPN11-204ENST00000531326 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
PTPN11-204ENST00000531326 INE1O15225 51 aa3.57□□□□□ -1.84
PTPN11-204ENST00000531326 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
PTPN11-204ENST00000531326 PRM1P04553 51 aa3.31□□□□□ -1.88
PTPN11-204ENST00000531326 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PTPN11-204ENST00000531326 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
PTPN11-204ENST00000531326 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PTPN11-204ENST00000531326 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 57.1 ms