RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 A6NED7 52 aa6.93□□□□□ -1.3
PACSIN3-208ENST00000531226 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
PACSIN3-208ENST00000531226 MT1GP13640 62 aa6.82□□□□□ -1.32
PACSIN3-208ENST00000531226 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
PACSIN3-208ENST00000531226 MT1LQ93083 61 aa6.79□□□□□ -1.32
PACSIN3-208ENST00000531226 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
PACSIN3-208ENST00000531226 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
PACSIN3-208ENST00000531226 MT1MQ8N339 61 aa6.71□□□□□ -1.34
PACSIN3-208ENST00000531226 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
PACSIN3-208ENST00000531226 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
PACSIN3-208ENST00000531226 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
PACSIN3-208ENST00000531226 ROMO1P60602 79 aa6.55□□□□□ -1.36
PACSIN3-208ENST00000531226 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
PACSIN3-208ENST00000531226 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
PACSIN3-208ENST00000531226 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
PACSIN3-208ENST00000531226 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
PACSIN3-208ENST00000531226 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
PACSIN3-208ENST00000531226 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
PACSIN3-208ENST00000531226 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
PACSIN3-208ENST00000531226 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
PACSIN3-208ENST00000531226 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
PACSIN3-208ENST00000531226 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
PACSIN3-208ENST00000531226 MT4P47944 62 aa6.2□□□□□ -1.42
PACSIN3-208ENST00000531226 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
PACSIN3-208ENST00000531226 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
PACSIN3-208ENST00000531226 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
PACSIN3-208ENST00000531226 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
PACSIN3-208ENST00000531226 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
PACSIN3-208ENST00000531226 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
PACSIN3-208ENST00000531226 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
PACSIN3-208ENST00000531226 KRTAP5-10Q6L8G5 202 aa5.92□□□□□ -1.46
PACSIN3-208ENST00000531226 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
PACSIN3-208ENST00000531226 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
PACSIN3-208ENST00000531226 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
PACSIN3-208ENST00000531226 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
PACSIN3-208ENST00000531226 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
PACSIN3-208ENST00000531226 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
PACSIN3-208ENST00000531226 MT1AP04731 61 aa5.79□□□□□ -1.48
PACSIN3-208ENST00000531226 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
PACSIN3-208ENST00000531226 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
PACSIN3-208ENST00000531226 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
PACSIN3-208ENST00000531226 KRTAP5-7Q6L8G8 165 aa5.7□□□□□ -1.5
PACSIN3-208ENST00000531226 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
PACSIN3-208ENST00000531226 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
PACSIN3-208ENST00000531226 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
PACSIN3-208ENST00000531226 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
PACSIN3-208ENST00000531226 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
PACSIN3-208ENST00000531226 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
PACSIN3-208ENST00000531226 MT3P25713 68 aa5.27□□□□□ -1.57
PACSIN3-208ENST00000531226 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
PACSIN3-208ENST00000531226 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
PACSIN3-208ENST00000531226 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
PACSIN3-208ENST00000531226 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
PACSIN3-208ENST00000531226 MUC5BQ9HC84 5762 aaPredicted RBP4.97□□□□□ -1.61
PACSIN3-208ENST00000531226 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
PACSIN3-208ENST00000531226 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
PACSIN3-208ENST00000531226 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
PACSIN3-208ENST00000531226 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
PACSIN3-208ENST00000531226 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
PACSIN3-208ENST00000531226 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
PACSIN3-208ENST00000531226 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
PACSIN3-208ENST00000531226 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
PACSIN3-208ENST00000531226 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
PACSIN3-208ENST00000531226 H3BS24 57 aa4.28□□□□□ -1.72
PACSIN3-208ENST00000531226 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
PACSIN3-208ENST00000531226 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
PACSIN3-208ENST00000531226 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
PACSIN3-208ENST00000531226 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
PACSIN3-208ENST00000531226 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
PACSIN3-208ENST00000531226 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
PACSIN3-208ENST00000531226 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
PACSIN3-208ENST00000531226 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
PACSIN3-208ENST00000531226 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
PACSIN3-208ENST00000531226 INE1O15225 51 aa3.36□□□□□ -1.87
PACSIN3-208ENST00000531226 PRM1P04553 51 aa3.36□□□□□ -1.87
PACSIN3-208ENST00000531226 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
PACSIN3-208ENST00000531226 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
PACSIN3-208ENST00000531226 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 112.2 ms