RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
SRPRA-205ENST00000531104 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
SRPRA-205ENST00000531104 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
SRPRA-205ENST00000531104 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
SRPRA-205ENST00000531104 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
SRPRA-205ENST00000531104 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
SRPRA-205ENST00000531104 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
SRPRA-205ENST00000531104 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
SRPRA-205ENST00000531104 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
SRPRA-205ENST00000531104 MT1EP04732 61 aa3.96□□□□□ -1.78
SRPRA-205ENST00000531104 KMT2DO14686 5537 aa3.95□□□□□ -1.78
SRPRA-205ENST00000531104 MT1LQ93083 61 aa3.89□□□□□ -1.79
SRPRA-205ENST00000531104 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
SRPRA-205ENST00000531104 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
SRPRA-205ENST00000531104 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
SRPRA-205ENST00000531104 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
SRPRA-205ENST00000531104 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
SRPRA-205ENST00000531104 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
SRPRA-205ENST00000531104 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
SRPRA-205ENST00000531104 MT1GP13640 62 aa3.76□□□□□ -1.81
SRPRA-205ENST00000531104 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SRPRA-205ENST00000531104 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
SRPRA-205ENST00000531104 MT1MQ8N339 61 aa3.72□□□□□ -1.81
SRPRA-205ENST00000531104 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
SRPRA-205ENST00000531104 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
SRPRA-205ENST00000531104 MT3P25713 68 aa3.66□□□□□ -1.82
SRPRA-205ENST00000531104 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SRPRA-205ENST00000531104 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
SRPRA-205ENST00000531104 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
SRPRA-205ENST00000531104 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
SRPRA-205ENST00000531104 SPRR2EP22531 72 aa3.58□□□□□ -1.84
SRPRA-205ENST00000531104 SPRR2BP35325 72 aa3.58□□□□□ -1.84
SRPRA-205ENST00000531104 SPRR2AP35326 72 aa3.58□□□□□ -1.84
SRPRA-205ENST00000531104 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
SRPRA-205ENST00000531104 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
SRPRA-205ENST00000531104 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
SRPRA-205ENST00000531104 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
SRPRA-205ENST00000531104 SPRR2DP22532 72 aa3.44□□□□□ -1.86
SRPRA-205ENST00000531104 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SRPRA-205ENST00000531104 NEBP20929 6669 aa3.35□□□□□ -1.87
SRPRA-205ENST00000531104 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
SRPRA-205ENST00000531104 MT1AP04731 61 aa3.31□□□□□ -1.88
SRPRA-205ENST00000531104 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
SRPRA-205ENST00000531104 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SRPRA-205ENST00000531104 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
SRPRA-205ENST00000531104 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SRPRA-205ENST00000531104 INE1O15225 51 aa3.12□□□□□ -1.91
SRPRA-205ENST00000531104 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
SRPRA-205ENST00000531104 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
SRPRA-205ENST00000531104 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
SRPRA-205ENST00000531104 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
SRPRA-205ENST00000531104 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
SRPRA-205ENST00000531104 MT4P47944 62 aa2.96□□□□□ -1.94
SRPRA-205ENST00000531104 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SRPRA-205ENST00000531104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
SRPRA-205ENST00000531104 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SRPRA-205ENST00000531104 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SRPRA-205ENST00000531104 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SRPRA-205ENST00000531104 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
SRPRA-205ENST00000531104 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SRPRA-205ENST00000531104 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
SRPRA-205ENST00000531104 PRM1P04553 51 aa2.48□□□□□ -2.01
SRPRA-205ENST00000531104 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
SRPRA-205ENST00000531104 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
SRPRA-205ENST00000531104 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
SRPRA-205ENST00000531104 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SRPRA-205ENST00000531104 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
SRPRA-205ENST00000531104 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
SRPRA-205ENST00000531104 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SRPRA-205ENST00000531104 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
SRPRA-205ENST00000531104 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
SRPRA-205ENST00000531104 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SRPRA-205ENST00000531104 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
SRPRA-205ENST00000531104 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SRPRA-205ENST00000531104 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
SRPRA-205ENST00000531104 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
SRPRA-205ENST00000531104 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SRPRA-205ENST00000531104 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 185.6 ms