RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
PTPRK-219ENST00000531050 KRTAP10-7P60409 375 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-219ENST00000531050 MT1XP80297 61 aa2.79□□□□□ -1.96
PTPRK-219ENST00000531050 MT1BP07438 61 aa2.78□□□□□ -1.96
PTPRK-219ENST00000531050 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
PTPRK-219ENST00000531050 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
PTPRK-219ENST00000531050 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
PTPRK-219ENST00000531050 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
PTPRK-219ENST00000531050 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
PTPRK-219ENST00000531050 KRTAP4-7Q9BYR0 210 aa2.66□□□□□ -1.98
PTPRK-219ENST00000531050 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
PTPRK-219ENST00000531050 KRTAP4-9Q9BYQ8 210 aa2.6□□□□□ -1.99
PTPRK-219ENST00000531050 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
PTPRK-219ENST00000531050 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
PTPRK-219ENST00000531050 USH2AO75445 5202 aa2.56□□□□□ -2
PTPRK-219ENST00000531050 KMT2DO14686 5537 aa2.54□□□□□ -2
PTPRK-219ENST00000531050 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
PTPRK-219ENST00000531050 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
PTPRK-219ENST00000531050 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
PTPRK-219ENST00000531050 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
PTPRK-219ENST00000531050 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
PTPRK-219ENST00000531050 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
PTPRK-219ENST00000531050 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
PTPRK-219ENST00000531050 MT1LQ93083 61 aa2.44□□□□□ -2.02
PTPRK-219ENST00000531050 FCGBPQ9Y6R7 5405 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-219ENST00000531050 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
PTPRK-219ENST00000531050 PRM1P04553 51 aa2.39□□□□□ -2.03
PTPRK-219ENST00000531050 MT1EP04732 61 aa2.38□□□□□ -2.03
PTPRK-219ENST00000531050 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
PTPRK-219ENST00000531050 MT1GP13640 62 aa2.32□□□□□ -2.04
PTPRK-219ENST00000531050 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
PTPRK-219ENST00000531050 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
PTPRK-219ENST00000531050 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
PTPRK-219ENST00000531050 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
PTPRK-219ENST00000531050 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
PTPRK-219ENST00000531050 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
PTPRK-219ENST00000531050 MT1AP04731 61 aa2.27□□□□□ -2.05
PTPRK-219ENST00000531050 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
PTPRK-219ENST00000531050 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PTPRK-219ENST00000531050 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
PTPRK-219ENST00000531050 MT1MQ8N339 61 aa2.23□□□□□ -2.05
PTPRK-219ENST00000531050 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
PTPRK-219ENST00000531050 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
PTPRK-219ENST00000531050 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
PTPRK-219ENST00000531050 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
PTPRK-219ENST00000531050 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
PTPRK-219ENST00000531050 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
PTPRK-219ENST00000531050 MT3P25713 68 aa2.15□□□□□ -2.07
PTPRK-219ENST00000531050 KRTAP5-9P26371 169 aa2.15□□□□□ -2.07
PTPRK-219ENST00000531050 SPRR2EP22531 72 aa2.1□□□□□ -2.07
PTPRK-219ENST00000531050 SPRR2BP35325 72 aa2.1□□□□□ -2.07
PTPRK-219ENST00000531050 SPRR2AP35326 72 aa2.1□□□□□ -2.07
PTPRK-219ENST00000531050 NEBP20929 6669 aa2.09□□□□□ -2.07
PTPRK-219ENST00000531050 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
PTPRK-219ENST00000531050 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
PTPRK-219ENST00000531050 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
PTPRK-219ENST00000531050 SPRR2DP22532 72 aa2.02□□□□□ -2.09
PTPRK-219ENST00000531050 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
PTPRK-219ENST00000531050 KRTAP20-1Q3LI63 56 aa1.98□□□□□ -2.09
PTPRK-219ENST00000531050 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
PTPRK-219ENST00000531050 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
PTPRK-219ENST00000531050 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
PTPRK-219ENST00000531050 MT4P47944 62 aa1.78□□□□□ -2.12
PTPRK-219ENST00000531050 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
PTPRK-219ENST00000531050 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
PTPRK-219ENST00000531050 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
PTPRK-219ENST00000531050 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
PTPRK-219ENST00000531050 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
PTPRK-219ENST00000531050 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
PTPRK-219ENST00000531050 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
PTPRK-219ENST00000531050 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
PTPRK-219ENST00000531050 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
PTPRK-219ENST00000531050 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
PTPRK-219ENST00000531050 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
PTPRK-219ENST00000531050 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
PTPRK-219ENST00000531050 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
PTPRK-219ENST00000531050 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
PTPRK-219ENST00000531050 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 145.6 ms