RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 K7ERS5 55 aa4.34□□□□□ -1.71
LTBP3-219ENST00000530990 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
LTBP3-219ENST00000530990 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
LTBP3-219ENST00000530990 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
LTBP3-219ENST00000530990 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
LTBP3-219ENST00000530990 MT1LQ93083 61 aa4.25□□□□□ -1.73
LTBP3-219ENST00000530990 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
LTBP3-219ENST00000530990 MT1GP13640 62 aa4.23□□□□□ -1.73
LTBP3-219ENST00000530990 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
LTBP3-219ENST00000530990 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
LTBP3-219ENST00000530990 MT1MQ8N339 61 aa4.19□□□□□ -1.74
LTBP3-219ENST00000530990 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
LTBP3-219ENST00000530990 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
LTBP3-219ENST00000530990 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
LTBP3-219ENST00000530990 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
LTBP3-219ENST00000530990 ROMO1P60602 79 aa4.1□□□□□ -1.75
LTBP3-219ENST00000530990 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
LTBP3-219ENST00000530990 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
LTBP3-219ENST00000530990 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
LTBP3-219ENST00000530990 H3BS24 57 aa4.03□□□□□ -1.76
LTBP3-219ENST00000530990 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
LTBP3-219ENST00000530990 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
LTBP3-219ENST00000530990 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
LTBP3-219ENST00000530990 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
LTBP3-219ENST00000530990 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
LTBP3-219ENST00000530990 MT4P47944 62 aa3.93□□□□□ -1.78
LTBP3-219ENST00000530990 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
LTBP3-219ENST00000530990 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
LTBP3-219ENST00000530990 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
LTBP3-219ENST00000530990 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
LTBP3-219ENST00000530990 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
LTBP3-219ENST00000530990 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
LTBP3-219ENST00000530990 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
LTBP3-219ENST00000530990 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
LTBP3-219ENST00000530990 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
LTBP3-219ENST00000530990 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
LTBP3-219ENST00000530990 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
LTBP3-219ENST00000530990 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
LTBP3-219ENST00000530990 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
LTBP3-219ENST00000530990 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
LTBP3-219ENST00000530990 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
LTBP3-219ENST00000530990 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
LTBP3-219ENST00000530990 MT1AP04731 61 aa3.61□□□□□ -1.83
LTBP3-219ENST00000530990 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
LTBP3-219ENST00000530990 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
LTBP3-219ENST00000530990 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
LTBP3-219ENST00000530990 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
LTBP3-219ENST00000530990 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
LTBP3-219ENST00000530990 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
LTBP3-219ENST00000530990 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
LTBP3-219ENST00000530990 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
LTBP3-219ENST00000530990 MT3P25713 68 aa3.28□□□□□ -1.88
LTBP3-219ENST00000530990 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
LTBP3-219ENST00000530990 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
LTBP3-219ENST00000530990 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
LTBP3-219ENST00000530990 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
LTBP3-219ENST00000530990 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
LTBP3-219ENST00000530990 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
LTBP3-219ENST00000530990 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
LTBP3-219ENST00000530990 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
LTBP3-219ENST00000530990 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
LTBP3-219ENST00000530990 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
LTBP3-219ENST00000530990 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
LTBP3-219ENST00000530990 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
LTBP3-219ENST00000530990 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
LTBP3-219ENST00000530990 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
LTBP3-219ENST00000530990 INE1O15225 51 aa2.63□□□□□ -1.99
LTBP3-219ENST00000530990 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
LTBP3-219ENST00000530990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
LTBP3-219ENST00000530990 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
LTBP3-219ENST00000530990 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
LTBP3-219ENST00000530990 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
LTBP3-219ENST00000530990 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
LTBP3-219ENST00000530990 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
LTBP3-219ENST00000530990 PRM1P04553 51 aa2.12□□□□□ -2.07
LTBP3-219ENST00000530990 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
LTBP3-219ENST00000530990 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
LTBP3-219ENST00000530990 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 140.6 ms