RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 MDN1Q9NU22 5596 aa8.97□□□□□ -0.97
ME3-209ENST00000530520 NEBP20929 6669 aa8.88□□□□□ -0.99
ME3-209ENST00000530520 KRTAP19-3Q7Z4W3 81 aa8.88□□□□□ -0.99
ME3-209ENST00000530520 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
ME3-209ENST00000530520 MT1LQ93083 61 aa8.85□□□□□ -0.99
ME3-209ENST00000530520 KTN1-AS1Q86SY8 53 aa8.83□□□□□ -1
ME3-209ENST00000530520 LCE5AQ5TCM9 118 aa8.77□□□□□ -1.01
ME3-209ENST00000530520 KRTAP15-1Q3LI76 137 aa8.75□□□□□ -1.01
ME3-209ENST00000530520 MT1GP13640 62 aa8.74□□□□□ -1.01
ME3-209ENST00000530520 SPRR2DP22532 72 aa8.71□□□□□ -1.02
ME3-209ENST00000530520 MT1MQ8N339 61 aa8.62□□□□□ -1.03
ME3-209ENST00000530520 KRTAP19-4Q3LI73 84 aa8.54□□□□□ -1.04
ME3-209ENST00000530520 KRTAP4-7Q9BYR0 210 aa8.49□□□□□ -1.05
ME3-209ENST00000530520 KRTAP20-1Q3LI63 56 aa8.44□□□□□ -1.06
ME3-209ENST00000530520 LCE3CQ5T5A8 94 aa8.43□□□□□ -1.06
ME3-209ENST00000530520 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
ME3-209ENST00000530520 KRTAP2-3P0C7H8 128 aa8.41□□□□□ -1.06
ME3-209ENST00000530520 KRTAP4-3Q9BYR4 195 aa8.41□□□□□ -1.06
ME3-209ENST00000530520 KRTAP2-4Q9BYR9 128 aa8.41□□□□□ -1.06
ME3-209ENST00000530520 LCE3BQ5TA77 95 aa8.4□□□□□ -1.06
ME3-209ENST00000530520 DSTQ03001 7570 aaKnown RBP8.3□□□□□ -1.08
ME3-209ENST00000530520 KRTAP2-2Q9BYT5 123 aa8.19□□□□□ -1.1
ME3-209ENST00000530520 KRTAP2-1Q9BYU5 128 aa8.19□□□□□ -1.1
ME3-209ENST00000530520 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
ME3-209ENST00000530520 KRTAP9-6A8MVA2 160 aa7.93□□□□□ -1.14
ME3-209ENST00000530520 SPRR5A0A1B0GTR4 108 aa7.82□□□□□ -1.16
ME3-209ENST00000530520 KRTAP5-5Q701N2 237 aaPredicted RBP7.8□□□□□ -1.16
ME3-209ENST00000530520 LCE4AQ5TA78 99 aa7.71□□□□□ -1.17
ME3-209ENST00000530520 KRTAP5-4Q6L8H1 288 aa7.71□□□□□ -1.18
ME3-209ENST00000530520 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
ME3-209ENST00000530520 MT4P47944 62 aa7.57□□□□□ -1.2
ME3-209ENST00000530520 MT1AP04731 61 aa7.54□□□□□ -1.2
ME3-209ENST00000530520 LCE1DQ5T752 114 aa7.52□□□□□ -1.21
ME3-209ENST00000530520 KRTAP6-1Q3LI64 71 aa7.46□□□□□ -1.22
ME3-209ENST00000530520 KRTAP12-4P60329 112 aa7.43□□□□□ -1.22
ME3-209ENST00000530520 KRTAP4-6Q9BYQ5 205 aa7.42□□□□□ -1.22
ME3-209ENST00000530520 LUZP6Q538Z0 58 aa7.36□□□□□ -1.23
ME3-209ENST00000530520 SYNE1Q8NF91 8797 aaKnown RBP7.36□□□□□ -1.23
ME3-209ENST00000530520 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
ME3-209ENST00000530520 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
ME3-209ENST00000530520 KRTAP9-4Q9BYQ2 154 aa7.2□□□□□ -1.26
ME3-209ENST00000530520 KRTAP5-3Q6L8H2 238 aa6.99□□□□□ -1.29
ME3-209ENST00000530520 KRTAP6-2Q3LI66 62 aa6.97□□□□□ -1.29
ME3-209ENST00000530520 KRTAP5-2Q701N4 177 aa6.9□□□□□ -1.31
ME3-209ENST00000530520 MT3P25713 68 aa6.86□□□□□ -1.31
ME3-209ENST00000530520 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
ME3-209ENST00000530520 AHNAK2Q8IVF2 5795 aa6.75□□□□□ -1.33
ME3-209ENST00000530520 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
ME3-209ENST00000530520 GPR98Q8WXG9 6306 aa6.5□□□□□ -1.37
ME3-209ENST00000530520 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
ME3-209ENST00000530520 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
ME3-209ENST00000530520 LCE3DQ9BYE3 92 aa6.25□□□□□ -1.41
ME3-209ENST00000530520 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
ME3-209ENST00000530520 KRTAP5-7Q6L8G8 165 aa6.16□□□□□ -1.42
ME3-209ENST00000530520 LCE1EQ5T753 118 aa6.07□□□□□ -1.44
ME3-209ENST00000530520 KRTAP5-1Q6L8H4 278 aa6.05□□□□□ -1.44
ME3-209ENST00000530520 LCE3EQ5T5B0 92 aa6.01□□□□□ -1.45
ME3-209ENST00000530520 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
ME3-209ENST00000530520 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
ME3-209ENST00000530520 LCE1BQ5T7P3 118 aa5.72□□□□□ -1.49
ME3-209ENST00000530520 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
ME3-209ENST00000530520 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
ME3-209ENST00000530520 LCE1CQ5T751 118 aa5.65□□□□□ -1.5
ME3-209ENST00000530520 INE1O15225 51 aa5.54□□□□□ -1.52
ME3-209ENST00000530520 H3BS24 57 aa5.44□□□□□ -1.54
ME3-209ENST00000530520 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
ME3-209ENST00000530520 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
ME3-209ENST00000530520 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.22□□□□□ -1.57
ME3-209ENST00000530520 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
ME3-209ENST00000530520 PRM1P04553 51 aa4.99□□□□□ -1.61
ME3-209ENST00000530520 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
ME3-209ENST00000530520 KRTAP21-2Q3LI59 83 aa4.87□□□□□ -1.63
ME3-209ENST00000530520 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
ME3-209ENST00000530520 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
ME3-209ENST00000530520 PHGR1C9JFL3 82 aa4.32□□□□□ -1.72
ME3-209ENST00000530520 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
ME3-209ENST00000530520 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
ME3-209ENST00000530520 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 54.9 ms