RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 LOC101927531A0A1B0GV80 90 aa1.97□□□□□ -2.09
VPS26B-205ENST00000530402 LCA10Q71F78 164 aa1.97□□□□□ -2.09
VPS26B-205ENST00000530402 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
VPS26B-205ENST00000530402 TRAV22A0A0B4J277 110 aa1.95□□□□□ -2.1
VPS26B-205ENST00000530402 PMAIP1Q13794 54 aa1.95□□□□□ -2.1
VPS26B-205ENST00000530402 CYP4F30PQ9H0H9 118 aa1.95□□□□□ -2.1
VPS26B-205ENST00000530402 C20orf197Q8N268 126 aa1.94□□□□□ -2.1
VPS26B-205ENST00000530402 A0A087WVE0 104 aa1.93□□□□□ -2.1
VPS26B-205ENST00000530402 H7BZZ5 65 aa1.93□□□□□ -2.1
VPS26B-205ENST00000530402 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
VPS26B-205ENST00000530402 NEBP20929 6669 aa1.92□□□□□ -2.1
VPS26B-205ENST00000530402 H0Y9P7 68 aa1.92□□□□□ -2.1
VPS26B-205ENST00000530402 PLAC4Q8WY50 150 aa1.92□□□□□ -2.1
VPS26B-205ENST00000530402 CYSTM1Q9H1C7 97 aa1.92□□□□□ -2.1
VPS26B-205ENST00000530402 H0YAA0 97 aa1.9□□□□□ -2.11
VPS26B-205ENST00000530402 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
VPS26B-205ENST00000530402 LINC00208Q96KT6 92 aa1.9□□□□□ -2.11
VPS26B-205ENST00000530402 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
VPS26B-205ENST00000530402 MT1BP07438 61 aa1.88□□□□□ -2.11
VPS26B-205ENST00000530402 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
VPS26B-205ENST00000530402 Q1T7F1 81 aa1.86□□□□□ -2.11
VPS26B-205ENST00000530402 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
VPS26B-205ENST00000530402 SPTSSBQ8NFR3 76 aa1.86□□□□□ -2.11
VPS26B-205ENST00000530402 M0QZ58 72 aa1.84□□□□□ -2.11
VPS26B-205ENST00000530402 LINC01554Q52M75 96 aa1.84□□□□□ -2.11
VPS26B-205ENST00000530402 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
VPS26B-205ENST00000530402 ACYP2P14621 99 aa1.83□□□□□ -2.12
VPS26B-205ENST00000530402 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
VPS26B-205ENST00000530402 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
VPS26B-205ENST00000530402 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
VPS26B-205ENST00000530402 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
VPS26B-205ENST00000530402 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
VPS26B-205ENST00000530402 SPRR2EP22531 72 aa1.8□□□□□ -2.12
VPS26B-205ENST00000530402 SPRR2BP35325 72 aa1.8□□□□□ -2.12
VPS26B-205ENST00000530402 SPRR2AP35326 72 aa1.8□□□□□ -2.12
VPS26B-205ENST00000530402 DMAC1Q96GE9 116 aa1.8□□□□□ -2.12
VPS26B-205ENST00000530402 PRR15LQ9BU68 103 aa1.77□□□□□ -2.13
VPS26B-205ENST00000530402 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
VPS26B-205ENST00000530402 MT1XP80297 61 aa1.76□□□□□ -2.13
VPS26B-205ENST00000530402 KRTAP2-1Q9BYU5 128 aa1.76□□□□□ -2.13
VPS26B-205ENST00000530402 SPRR2DP22532 72 aa1.75□□□□□ -2.13
VPS26B-205ENST00000530402 LINC01558Q9Y6Z2 57 aa1.75□□□□□ -2.13
VPS26B-205ENST00000530402 KMT2DO14686 5537 aa1.75□□□□□ -2.13
VPS26B-205ENST00000530402 MDN1Q9NU22 5596 aa1.73□□□□□ -2.13
VPS26B-205ENST00000530402 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
VPS26B-205ENST00000530402 A0A1B0GU69 56 aa1.67□□□□□ -2.14
VPS26B-205ENST00000530402 UQCR11O14957 56 aa1.67□□□□□ -2.14
VPS26B-205ENST00000530402 A0A0D9SG42 100 aa1.66□□□□□ -2.14
VPS26B-205ENST00000530402 SPATA8Q6RVD6 105 aa1.66□□□□□ -2.14
VPS26B-205ENST00000530402 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
VPS26B-205ENST00000530402 TNP1P09430 55 aa1.6□□□□□ -2.15
VPS26B-205ENST00000530402 ROMO1P60602 79 aa1.6□□□□□ -2.15
VPS26B-205ENST00000530402 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
VPS26B-205ENST00000530402 MT1GP13640 62 aa1.59□□□□□ -2.15
VPS26B-205ENST00000530402 MT1EP04732 61 aa1.58□□□□□ -2.16
VPS26B-205ENST00000530402 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
VPS26B-205ENST00000530402 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
VPS26B-205ENST00000530402 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
VPS26B-205ENST00000530402 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
VPS26B-205ENST00000530402 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
VPS26B-205ENST00000530402 MT4P47944 62 aa1.52□□□□□ -2.17
VPS26B-205ENST00000530402 MT1MQ8N339 61 aa1.5□□□□□ -2.17
VPS26B-205ENST00000530402 MT1LQ93083 61 aa1.5□□□□□ -2.17
VPS26B-205ENST00000530402 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
VPS26B-205ENST00000530402 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
VPS26B-205ENST00000530402 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
VPS26B-205ENST00000530402 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.2
VPS26B-205ENST00000530402 INE1O15225 51 aa1.32□□□□□ -2.2
VPS26B-205ENST00000530402 MT1AP04731 61 aa1.29□□□□□ -2.2
VPS26B-205ENST00000530402 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
VPS26B-205ENST00000530402 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
VPS26B-205ENST00000530402 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
VPS26B-205ENST00000530402 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
VPS26B-205ENST00000530402 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
VPS26B-205ENST00000530402 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
VPS26B-205ENST00000530402 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
VPS26B-205ENST00000530402 PRM1P04553 51 aa0.78□□□□□ -2.28
VPS26B-205ENST00000530402 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 126.1 ms