RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 DNAH10Q8IVF4 4471 aa0.97□□□□□ -2.25
ARHGEF12-209ENST00000530388 DYNC1H1Q14204 4646 aaKnown RBP0.97□□□□□ -2.25
ARHGEF12-209ENST00000530388 FLNBO75369 2602 aaKnown RBP0.97□□□□□ -2.25
ARHGEF12-209ENST00000530388 USP9YO00507 2555 aaPredicted RBP0.96□□□□□ -2.25
ARHGEF12-209ENST00000530388 FLNCQ14315 2725 aa0.96□□□□□ -2.26
ARHGEF12-209ENST00000530388 FSIP2Q5CZC0 6907 aa0.96□□□□□ -2.26
ARHGEF12-209ENST00000530388 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
ARHGEF12-209ENST00000530388 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
ARHGEF12-209ENST00000530388 DNAH2Q9P225 4427 aa0.95□□□□□ -2.26
ARHGEF12-209ENST00000530388 KRTAP4-3Q9BYR4 195 aa0.95□□□□□ -2.26
ARHGEF12-209ENST00000530388 RPS29P62273 56 aaKnown RBP0.94□□□□□ -2.26
ARHGEF12-209ENST00000530388 CRCT1Q9UGL9 99 aa0.93□□□□□ -2.26
ARHGEF12-209ENST00000530388 STARD9Q9P2P6 4700 aa0.93□□□□□ -2.26
ARHGEF12-209ENST00000530388 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
ARHGEF12-209ENST00000530388 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
ARHGEF12-209ENST00000530388 MYO9AB2RTY4 2548 aa0.92□□□□□ -2.26
ARHGEF12-209ENST00000530388 HIVEP1P15822 2718 aa0.9□□□□□ -2.26
ARHGEF12-209ENST00000530388 SPRR2DP22532 72 aa0.9□□□□□ -2.27
ARHGEF12-209ENST00000530388 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
ARHGEF12-209ENST00000530388 PLECQ15149 4684 aaKnown RBP0.89□□□□□ -2.27
ARHGEF12-209ENST00000530388 KMT2DO14686 5537 aa0.89□□□□□ -2.27
ARHGEF12-209ENST00000530388 SPRR2BP35325 72 aa0.88□□□□□ -2.27
ARHGEF12-209ENST00000530388 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
ARHGEF12-209ENST00000530388 CENPEQ02224 2701 aa0.87□□□□□ -2.27
ARHGEF12-209ENST00000530388 USH2AO75445 5202 aa0.87□□□□□ -2.27
ARHGEF12-209ENST00000530388 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
ARHGEF12-209ENST00000530388 LRP1BQ9NZR2 4599 aa0.86□□□□□ -2.27
ARHGEF12-209ENST00000530388 LRP2P98164 4655 aa0.86□□□□□ -2.27
ARHGEF12-209ENST00000530388 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
ARHGEF12-209ENST00000530388 FLNAP21333 2647 aaKnown RBP0.84□□□□□ -2.27
ARHGEF12-209ENST00000530388 MDN1Q9NU22 5596 aa0.84□□□□□ -2.27
ARHGEF12-209ENST00000530388 FCGBPQ9Y6R7 5405 aaPredicted RBP0.84□□□□□ -2.28
ARHGEF12-209ENST00000530388 DNAH17Q9UFH2 4485 aa0.84□□□□□ -2.28
ARHGEF12-209ENST00000530388 DEFB4AO15263 64 aa0.83□□□□□ -2.28
ARHGEF12-209ENST00000530388 APOBP04114 4563 aaKnown RBP0.83□□□□□ -2.28
ARHGEF12-209ENST00000530388 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
ARHGEF12-209ENST00000530388 SPRR2AP35326 72 aa0.83□□□□□ -2.28
ARHGEF12-209ENST00000530388 DNAH5Q8TE73 4624 aa0.82□□□□□ -2.28
ARHGEF12-209ENST00000530388 DNAH11Q96DT5 4516 aa0.82□□□□□ -2.28
ARHGEF12-209ENST00000530388 NEBP20929 6669 aa0.82□□□□□ -2.28
ARHGEF12-209ENST00000530388 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
ARHGEF12-209ENST00000530388 HRNRQ86YZ3 2850 aaPredicted RBP0.81□□□□□ -2.28
ARHGEF12-209ENST00000530388 FAT1Q14517 4588 aa0.8□□□□□ -2.28
ARHGEF12-209ENST00000530388 MT1AP04731 61 aa0.8□□□□□ -2.28
ARHGEF12-209ENST00000530388 KRTAP20-1Q3LI63 56 aa0.8□□□□□ -2.28
ARHGEF12-209ENST00000530388 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
ARHGEF12-209ENST00000530388 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
ARHGEF12-209ENST00000530388 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
ARHGEF12-209ENST00000530388 LPAP08519 4548 aa0.78□□□□□ -2.28
ARHGEF12-209ENST00000530388 FLGP20930 4061 aaPredicted RBP0.75□□□□□ -2.29
ARHGEF12-209ENST00000530388 SPRR2FQ96RM1 72 aa0.74□□□□□ -2.29
ARHGEF12-209ENST00000530388 SPRR2EP22531 72 aa0.73□□□□□ -2.29
ARHGEF12-209ENST00000530388 DNAH8Q96JB1 4490 aa0.73□□□□□ -2.29
ARHGEF12-209ENST00000530388 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
ARHGEF12-209ENST00000530388 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
ARHGEF12-209ENST00000530388 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
ARHGEF12-209ENST00000530388 KRTAP21-2Q3LI59 83 aa0.68□□□□□ -2.3
ARHGEF12-209ENST00000530388 MUC17Q685J3 4493 aa0.68□□□□□ -2.3
ARHGEF12-209ENST00000530388 MT1HL1P0DM35 61 aa0.67□□□□□ -2.3
ARHGEF12-209ENST00000530388 KRTAP4-1Q9BYQ7 146 aa0.63□□□□□ -2.31
ARHGEF12-209ENST00000530388 KRTAP19-6Q3LI70 58 aa0.63□□□□□ -2.31
ARHGEF12-209ENST00000530388 MT1HP80294 61 aa0.6□□□□□ -2.31
ARHGEF12-209ENST00000530388 MT1EP04732 61 aa0.59□□□□□ -2.31
ARHGEF12-209ENST00000530388 MT1FP04733 61 aa0.59□□□□□ -2.32
ARHGEF12-209ENST00000530388 MT1LQ93083 61 aa0.58□□□□□ -2.32
ARHGEF12-209ENST00000530388 MT1GP13640 62 aa0.55□□□□□ -2.32
ARHGEF12-209ENST00000530388 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
ARHGEF12-209ENST00000530388 KRTAP19-8Q3LI54 63 aa0.54□□□□□ -2.32
ARHGEF12-209ENST00000530388 MT1BP07438 61 aa0.51□□□□□ -2.33
ARHGEF12-209ENST00000530388 MT2AP02795 61 aa0.5□□□□□ -2.33
ARHGEF12-209ENST00000530388 MT1XP80297 61 aa0.5□□□□□ -2.33
ARHGEF12-209ENST00000530388 MT1MQ8N339 61 aa0.47□□□□□ -2.33
ARHGEF12-209ENST00000530388 MT4P47944 62 aa0.41□□□□□ -2.34
ARHGEF12-209ENST00000530388 KRTAP19-7Q3SYF9 63 aa0.4□□□□□ -2.35
ARHGEF12-209ENST00000530388 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
ARHGEF12-209ENST00000530388 KRTAP20-2Q3LI61 65 aa0.38□□□□□ -2.35
ARHGEF12-209ENST00000530388 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
ARHGEF12-209ENST00000530388 KRTAP19-2Q3LHN2 52 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 121 ms