RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
SF3B2-208ENST00000529994 MT1GP13640 62 aa4.1□□□□□ -1.75
SF3B2-208ENST00000529994 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
SF3B2-208ENST00000529994 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
SF3B2-208ENST00000529994 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
SF3B2-208ENST00000529994 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
SF3B2-208ENST00000529994 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
SF3B2-208ENST00000529994 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
SF3B2-208ENST00000529994 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
SF3B2-208ENST00000529994 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
SF3B2-208ENST00000529994 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
SF3B2-208ENST00000529994 MT1MQ8N339 61 aa4.05□□□□□ -1.76
SF3B2-208ENST00000529994 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
SF3B2-208ENST00000529994 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
SF3B2-208ENST00000529994 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
SF3B2-208ENST00000529994 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
SF3B2-208ENST00000529994 TNP1P09430 55 aa4.01□□□□□ -1.77
SF3B2-208ENST00000529994 TMEM258P61165 79 aa4.01□□□□□ -1.77
SF3B2-208ENST00000529994 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
SF3B2-208ENST00000529994 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
SF3B2-208ENST00000529994 MT1LQ93083 61 aa3.98□□□□□ -1.77
SF3B2-208ENST00000529994 UQCR11O14957 56 aa3.94□□□□□ -1.78
SF3B2-208ENST00000529994 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
SF3B2-208ENST00000529994 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
SF3B2-208ENST00000529994 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SF3B2-208ENST00000529994 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
SF3B2-208ENST00000529994 PSPHP1O15172 72 aa3.84□□□□□ -1.79
SF3B2-208ENST00000529994 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
SF3B2-208ENST00000529994 K7ERS5 55 aa3.81□□□□□ -1.8
SF3B2-208ENST00000529994 V9GYY9 64 aa3.8□□□□□ -1.8
SF3B2-208ENST00000529994 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
SF3B2-208ENST00000529994 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
SF3B2-208ENST00000529994 Q1T7F1 81 aa3.74□□□□□ -1.81
SF3B2-208ENST00000529994 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
SF3B2-208ENST00000529994 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
SF3B2-208ENST00000529994 A6NED7 52 aa3.7□□□□□ -1.82
SF3B2-208ENST00000529994 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
SF3B2-208ENST00000529994 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
SF3B2-208ENST00000529994 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
SF3B2-208ENST00000529994 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
SF3B2-208ENST00000529994 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
SF3B2-208ENST00000529994 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
SF3B2-208ENST00000529994 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
SF3B2-208ENST00000529994 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
SF3B2-208ENST00000529994 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
SF3B2-208ENST00000529994 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
SF3B2-208ENST00000529994 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
SF3B2-208ENST00000529994 ROMO1P60602 79 aa3.54□□□□□ -1.84
SF3B2-208ENST00000529994 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
SF3B2-208ENST00000529994 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
SF3B2-208ENST00000529994 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SF3B2-208ENST00000529994 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
SF3B2-208ENST00000529994 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
SF3B2-208ENST00000529994 MT1AP04731 61 aa3.36□□□□□ -1.87
SF3B2-208ENST00000529994 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SF3B2-208ENST00000529994 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SF3B2-208ENST00000529994 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
SF3B2-208ENST00000529994 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
SF3B2-208ENST00000529994 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
SF3B2-208ENST00000529994 MT3P25713 68 aa3.09□□□□□ -1.91
SF3B2-208ENST00000529994 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
SF3B2-208ENST00000529994 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
SF3B2-208ENST00000529994 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
SF3B2-208ENST00000529994 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
SF3B2-208ENST00000529994 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
SF3B2-208ENST00000529994 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
SF3B2-208ENST00000529994 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SF3B2-208ENST00000529994 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
SF3B2-208ENST00000529994 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SF3B2-208ENST00000529994 INE1O15225 51 aa2.46□□□□□ -2.02
SF3B2-208ENST00000529994 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SF3B2-208ENST00000529994 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
SF3B2-208ENST00000529994 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
SF3B2-208ENST00000529994 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SF3B2-208ENST00000529994 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SF3B2-208ENST00000529994 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SF3B2-208ENST00000529994 PRM1P04553 51 aa1.84□□□□□ -2.11
SF3B2-208ENST00000529994 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 14.8 ms