RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
VPS11-203ENST00000529545 PRR15LQ9BU68 103 aa3.64□□□□□ -1.83
VPS11-203ENST00000529545 R4GN34 69 aa3.63□□□□□ -1.83
VPS11-203ENST00000529545 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
VPS11-203ENST00000529545 M0QZ58 72 aa3.58□□□□□ -1.84
VPS11-203ENST00000529545 A6NED7 52 aa3.57□□□□□ -1.84
VPS11-203ENST00000529545 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
VPS11-203ENST00000529545 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
VPS11-203ENST00000529545 ACYP2P14621 99 aa3.56□□□□□ -1.84
VPS11-203ENST00000529545 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
VPS11-203ENST00000529545 SPATA8Q6RVD6 105 aa3.55□□□□□ -1.84
VPS11-203ENST00000529545 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
VPS11-203ENST00000529545 P0C880 135 aa3.52□□□□□ -1.85
VPS11-203ENST00000529545 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
VPS11-203ENST00000529545 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
VPS11-203ENST00000529545 A0A1B0GU69 56 aa3.42□□□□□ -1.86
VPS11-203ENST00000529545 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
VPS11-203ENST00000529545 UQCR11O14957 56 aa3.42□□□□□ -1.86
VPS11-203ENST00000529545 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
VPS11-203ENST00000529545 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
VPS11-203ENST00000529545 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
VPS11-203ENST00000529545 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
VPS11-203ENST00000529545 MT4P47944 62 aa3.37□□□□□ -1.87
VPS11-203ENST00000529545 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
VPS11-203ENST00000529545 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
VPS11-203ENST00000529545 MT1EP04732 61 aa3.34□□□□□ -1.87
VPS11-203ENST00000529545 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
VPS11-203ENST00000529545 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
VPS11-203ENST00000529545 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
VPS11-203ENST00000529545 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
VPS11-203ENST00000529545 MT1GP13640 62 aa3.3□□□□□ -1.88
VPS11-203ENST00000529545 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
VPS11-203ENST00000529545 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
VPS11-203ENST00000529545 A0A1B0GU33 70 aa3.26□□□□□ -1.89
VPS11-203ENST00000529545 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
VPS11-203ENST00000529545 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
VPS11-203ENST00000529545 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
VPS11-203ENST00000529545 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VPS11-203ENST00000529545 A0A0D9SG42 100 aa3.21□□□□□ -1.9
VPS11-203ENST00000529545 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
VPS11-203ENST00000529545 MT1MQ8N339 61 aa3.21□□□□□ -1.9
VPS11-203ENST00000529545 ROMO1P60602 79 aa3.17□□□□□ -1.9
VPS11-203ENST00000529545 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
VPS11-203ENST00000529545 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
VPS11-203ENST00000529545 MT1LQ93083 61 aa3.15□□□□□ -1.91
VPS11-203ENST00000529545 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
VPS11-203ENST00000529545 K7ERS5 55 aa3.11□□□□□ -1.91
VPS11-203ENST00000529545 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
VPS11-203ENST00000529545 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
VPS11-203ENST00000529545 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
VPS11-203ENST00000529545 C10orf95Q9H7T3 257 aa3.04□□□□□ -1.92
VPS11-203ENST00000529545 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
VPS11-203ENST00000529545 LCE3AQ5TA76 89 aa3□□□□□ -1.93
VPS11-203ENST00000529545 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
VPS11-203ENST00000529545 TNP1P09430 55 aa2.97□□□□□ -1.93
VPS11-203ENST00000529545 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
VPS11-203ENST00000529545 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
VPS11-203ENST00000529545 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
VPS11-203ENST00000529545 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
VPS11-203ENST00000529545 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
VPS11-203ENST00000529545 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
VPS11-203ENST00000529545 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
VPS11-203ENST00000529545 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
VPS11-203ENST00000529545 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
VPS11-203ENST00000529545 MT1AP04731 61 aa2.69□□□□□ -1.98
VPS11-203ENST00000529545 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
VPS11-203ENST00000529545 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
VPS11-203ENST00000529545 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
VPS11-203ENST00000529545 LCE1CQ5T751 118 aa2.58□□□□□ -2
VPS11-203ENST00000529545 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
VPS11-203ENST00000529545 INE1O15225 51 aa2.41□□□□□ -2.02
VPS11-203ENST00000529545 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
VPS11-203ENST00000529545 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
VPS11-203ENST00000529545 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
VPS11-203ENST00000529545 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
VPS11-203ENST00000529545 PRM1P04553 51 aa1.65□□□□□ -2.15
VPS11-203ENST00000529545 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
VPS11-203ENST00000529545 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 37.2 ms