RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 TLN2Q9Y4G6 2542 aa0.96□□□□□ -2.26
SOX6-212ENST00000529469 HUWE1Q7Z6Z7 4374 aaKnown RBP0.96□□□□□ -2.26
SOX6-212ENST00000529469 DNAH17Q9UFH2 4485 aa0.95□□□□□ -2.26
SOX6-212ENST00000529469 TNXBP22105 4242 aa0.95□□□□□ -2.26
SOX6-212ENST00000529469 PLECQ15149 4684 aaKnown RBP0.95□□□□□ -2.26
SOX6-212ENST00000529469 PRM1P04553 51 aa0.95□□□□□ -2.26
SOX6-212ENST00000529469 HSPG2P98160 4391 aa0.95□□□□□ -2.26
SOX6-212ENST00000529469 DNAH5Q8TE73 4624 aa0.94□□□□□ -2.26
SOX6-212ENST00000529469 SMR3BP02814 79 aaPredicted RBP0.94□□□□□ -2.26
SOX6-212ENST00000529469 NSD1Q96L73 2696 aaPredicted RBP0.94□□□□□ -2.26
SOX6-212ENST00000529469 HYDINQ4G0P3 5121 aa0.93□□□□□ -2.26
SOX6-212ENST00000529469 EPPK1P58107 5090 aaKnown RBP0.92□□□□□ -2.26
SOX6-212ENST00000529469 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
SOX6-212ENST00000529469 MGAM2Q2M2H8 2515 aa0.92□□□□□ -2.26
SOX6-212ENST00000529469 KMT2CQ8NEZ4 4911 aaKnown RBP0.91□□□□□ -2.26
SOX6-212ENST00000529469 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
SOX6-212ENST00000529469 PKHD1P08F94 4074 aa0.9□□□□□ -2.26
SOX6-212ENST00000529469 RYR2Q92736 4967 aa0.89□□□□□ -2.27
SOX6-212ENST00000529469 CDH23Q9H251 3354 aa0.88□□□□□ -2.27
SOX6-212ENST00000529469 DYNC1H1Q14204 4646 aaKnown RBP0.88□□□□□ -2.27
SOX6-212ENST00000529469 LRP1Q07954 4544 aaKnown RBP0.88□□□□□ -2.27
SOX6-212ENST00000529469 ABCA13Q86UQ4 5058 aa0.88□□□□□ -2.27
SOX6-212ENST00000529469 HERC1Q15751 4861 aa0.86□□□□□ -2.27
SOX6-212ENST00000529469 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
SOX6-212ENST00000529469 FAT1Q14517 4588 aa0.86□□□□□ -2.27
SOX6-212ENST00000529469 LPAP08519 4548 aa0.86□□□□□ -2.27
SOX6-212ENST00000529469 KRTAP19-5Q3LI72 72 aa0.84□□□□□ -2.27
SOX6-212ENST00000529469 HERC2O95714 4834 aa0.84□□□□□ -2.28
SOX6-212ENST00000529469 FAT4Q6V0I7 4981 aa0.82□□□□□ -2.28
SOX6-212ENST00000529469 STARD9Q9P2P6 4700 aa0.82□□□□□ -2.28
SOX6-212ENST00000529469 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
SOX6-212ENST00000529469 FSIP2Q5CZC0 6907 aa0.81□□□□□ -2.28
SOX6-212ENST00000529469 NEBP20929 6669 aa0.8□□□□□ -2.28
SOX6-212ENST00000529469 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
SOX6-212ENST00000529469 MT1AP04731 61 aa0.79□□□□□ -2.28
SOX6-212ENST00000529469 MUC17Q685J3 4493 aa0.79□□□□□ -2.28
SOX6-212ENST00000529469 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
SOX6-212ENST00000529469 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
SOX6-212ENST00000529469 SSPOA2VEC9 5147 aa0.75□□□□□ -2.29
SOX6-212ENST00000529469 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
SOX6-212ENST00000529469 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
SOX6-212ENST00000529469 SPRR2DP22532 72 aa0.74□□□□□ -2.29
SOX6-212ENST00000529469 SPRR2GQ9BYE4 73 aa0.74□□□□□ -2.29
SOX6-212ENST00000529469 SPRR2BP35325 72 aa0.73□□□□□ -2.29
SOX6-212ENST00000529469 HMCN2Q8NDA2 5059 aa0.73□□□□□ -2.29
SOX6-212ENST00000529469 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
SOX6-212ENST00000529469 SPRR2AP35326 72 aa0.71□□□□□ -2.3
SOX6-212ENST00000529469 SPRR2FQ96RM1 72 aa0.71□□□□□ -2.3
SOX6-212ENST00000529469 RNF213Q63HN8 5207 aa0.71□□□□□ -2.3
SOX6-212ENST00000529469 LRP2P98164 4655 aa0.7□□□□□ -2.3
SOX6-212ENST00000529469 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
SOX6-212ENST00000529469 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
SOX6-212ENST00000529469 LRP1BQ9NZR2 4599 aa0.69□□□□□ -2.3
SOX6-212ENST00000529469 MT1EP04732 61 aa0.69□□□□□ -2.3
SOX6-212ENST00000529469 MT1XP80297 61 aa0.69□□□□□ -2.3
SOX6-212ENST00000529469 MT1LQ93083 61 aa0.68□□□□□ -2.3
SOX6-212ENST00000529469 SPRR2EP22531 72 aa0.67□□□□□ -2.3
SOX6-212ENST00000529469 KMT2DO14686 5537 aa0.66□□□□□ -2.3
SOX6-212ENST00000529469 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
SOX6-212ENST00000529469 KRTAP19-8Q3LI54 63 aa0.64□□□□□ -2.31
SOX6-212ENST00000529469 MDN1Q9NU22 5596 aa0.63□□□□□ -2.31
SOX6-212ENST00000529469 MT1GP13640 62 aa0.63□□□□□ -2.31
SOX6-212ENST00000529469 MT1HP80294 61 aa0.62□□□□□ -2.31
SOX6-212ENST00000529469 KRTAP19-2Q3LHN2 52 aa0.62□□□□□ -2.31
SOX6-212ENST00000529469 MUC12Q9UKN1 5478 aa0.6□□□□□ -2.31
SOX6-212ENST00000529469 MUC5ACP98088 5654 aa0.59□□□□□ -2.31
SOX6-212ENST00000529469 MT1BP07438 61 aa0.59□□□□□ -2.31
SOX6-212ENST00000529469 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
SOX6-212ENST00000529469 USH2AO75445 5202 aa0.59□□□□□ -2.32
SOX6-212ENST00000529469 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
SOX6-212ENST00000529469 MT2AP02795 61 aa0.52□□□□□ -2.33
SOX6-212ENST00000529469 MT1HL1P0DM35 61 aa0.52□□□□□ -2.33
SOX6-212ENST00000529469 MT1MQ8N339 61 aa0.52□□□□□ -2.33
SOX6-212ENST00000529469 MT1FP04733 61 aa0.51□□□□□ -2.33
SOX6-212ENST00000529469 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SOX6-212ENST00000529469 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
SOX6-212ENST00000529469 MT4P47944 62 aa0.3□□□□□ -2.36
SOX6-212ENST00000529469 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms