RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PRM1P04553 51 aa0.75□□□□□ -2.29
CTR9-204ENST00000529355 MAST4O15021 2626 aa0.75□□□□□ -2.29
CTR9-204ENST00000529355 DNAH10Q8IVF4 4471 aa0.75□□□□□ -2.29
CTR9-204ENST00000529355 DNAH1Q9P2D7 4330 aa0.75□□□□□ -2.29
CTR9-204ENST00000529355 TNXBP22105 4242 aa0.74□□□□□ -2.29
CTR9-204ENST00000529355 SYNE2Q8WXH0 6885 aaKnown RBP0.74□□□□□ -2.29
CTR9-204ENST00000529355 KRTAP19-5Q3LI72 72 aa0.73□□□□□ -2.29
CTR9-204ENST00000529355 MYCBP2O75592 4640 aa0.72□□□□□ -2.29
CTR9-204ENST00000529355 NEBP20929 6669 aa0.72□□□□□ -2.29
CTR9-204ENST00000529355 DNAH9Q9NYC9 4486 aa0.72□□□□□ -2.29
CTR9-204ENST00000529355 MT1AP04731 61 aa0.72□□□□□ -2.29
CTR9-204ENST00000529355 KMT2DO14686 5537 aa0.72□□□□□ -2.29
CTR9-204ENST00000529355 DNAH17Q9UFH2 4485 aa0.71□□□□□ -2.3
CTR9-204ENST00000529355 RYR1P21817 5038 aa0.71□□□□□ -2.3
CTR9-204ENST00000529355 FSIP2Q5CZC0 6907 aa0.71□□□□□ -2.3
CTR9-204ENST00000529355 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
CTR9-204ENST00000529355 KMT2CQ8NEZ4 4911 aaKnown RBP0.7□□□□□ -2.3
CTR9-204ENST00000529355 PLECQ15149 4684 aaKnown RBP0.7□□□□□ -2.3
CTR9-204ENST00000529355 SPRR2GQ9BYE4 73 aa0.7□□□□□ -2.3
CTR9-204ENST00000529355 FAT2Q9NYQ8 4349 aa0.69□□□□□ -2.3
CTR9-204ENST00000529355 DNAH5Q8TE73 4624 aa0.69□□□□□ -2.3
CTR9-204ENST00000529355 STARD9Q9P2P6 4700 aa0.69□□□□□ -2.3
CTR9-204ENST00000529355 PKHD1L1Q86WI1 4243 aa0.68□□□□□ -2.3
CTR9-204ENST00000529355 SPRR2BP35325 72 aa0.68□□□□□ -2.3
CTR9-204ENST00000529355 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
CTR9-204ENST00000529355 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
CTR9-204ENST00000529355 HYDINQ4G0P3 5121 aa0.67□□□□□ -2.3
CTR9-204ENST00000529355 SPRR2AP35326 72 aa0.67□□□□□ -2.3
CTR9-204ENST00000529355 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
CTR9-204ENST00000529355 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
CTR9-204ENST00000529355 ABCA13Q86UQ4 5058 aa0.66□□□□□ -2.3
CTR9-204ENST00000529355 SPRR2DP22532 72 aa0.66□□□□□ -2.3
CTR9-204ENST00000529355 RNF213Q63HN8 5207 aa0.65□□□□□ -2.3
CTR9-204ENST00000529355 RYR2Q92736 4967 aa0.65□□□□□ -2.3
CTR9-204ENST00000529355 MT1EP04732 61 aa0.65□□□□□ -2.31
CTR9-204ENST00000529355 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
CTR9-204ENST00000529355 LRP1BQ9NZR2 4599 aa0.64□□□□□ -2.31
CTR9-204ENST00000529355 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
CTR9-204ENST00000529355 DYNC1H1Q14204 4646 aaKnown RBP0.64□□□□□ -2.31
CTR9-204ENST00000529355 DNHD1Q96M86 4753 aa0.64□□□□□ -2.31
CTR9-204ENST00000529355 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
CTR9-204ENST00000529355 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
CTR9-204ENST00000529355 EPPK1P58107 5090 aaKnown RBP0.63□□□□□ -2.31
CTR9-204ENST00000529355 KRTAP19-8Q3LI54 63 aa0.63□□□□□ -2.31
CTR9-204ENST00000529355 MT1LQ93083 61 aa0.63□□□□□ -2.31
CTR9-204ENST00000529355 HERC1Q15751 4861 aa0.62□□□□□ -2.31
CTR9-204ENST00000529355 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
CTR9-204ENST00000529355 RYR3Q15413 4870 aa0.62□□□□□ -2.31
CTR9-204ENST00000529355 SSPOA2VEC9 5147 aa0.62□□□□□ -2.31
CTR9-204ENST00000529355 FAT1Q14517 4588 aa0.62□□□□□ -2.31
CTR9-204ENST00000529355 SPRR2EP22531 72 aa0.61□□□□□ -2.31
CTR9-204ENST00000529355 FAT4Q6V0I7 4981 aa0.61□□□□□ -2.31
CTR9-204ENST00000529355 MT1HP80294 61 aa0.59□□□□□ -2.31
CTR9-204ENST00000529355 MT1XP80297 61 aa0.59□□□□□ -2.31
CTR9-204ENST00000529355 LPAP08519 4548 aa0.59□□□□□ -2.32
CTR9-204ENST00000529355 MT1HL1P0DM35 61 aa0.57□□□□□ -2.32
CTR9-204ENST00000529355 KRTAP19-2Q3LHN2 52 aa0.56□□□□□ -2.32
CTR9-204ENST00000529355 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
CTR9-204ENST00000529355 MUC17Q685J3 4493 aa0.55□□□□□ -2.32
CTR9-204ENST00000529355 HMCN2Q8NDA2 5059 aa0.54□□□□□ -2.32
CTR9-204ENST00000529355 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
CTR9-204ENST00000529355 LRP2P98164 4655 aa0.53□□□□□ -2.32
CTR9-204ENST00000529355 MT1BP07438 61 aa0.52□□□□□ -2.33
CTR9-204ENST00000529355 KRTAP19-7Q3SYF9 63 aa0.52□□□□□ -2.33
CTR9-204ENST00000529355 HERC2O95714 4834 aa0.5□□□□□ -2.33
CTR9-204ENST00000529355 BIRC6Q9NR09 4857 aa0.5□□□□□ -2.33
CTR9-204ENST00000529355 MT1GP13640 62 aa0.49□□□□□ -2.33
CTR9-204ENST00000529355 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
CTR9-204ENST00000529355 MT2AP02795 61 aa0.48□□□□□ -2.33
CTR9-204ENST00000529355 MT1FP04733 61 aa0.48□□□□□ -2.33
CTR9-204ENST00000529355 MT1MQ8N339 61 aa0.48□□□□□ -2.33
CTR9-204ENST00000529355 USH2AO75445 5202 aa0.46□□□□□ -2.34
CTR9-204ENST00000529355 KRTAP6-1Q3LI64 71 aa0.44□□□□□ -2.34
CTR9-204ENST00000529355 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
CTR9-204ENST00000529355 MUC12Q9UKN1 5478 aa0.39□□□□□ -2.35
CTR9-204ENST00000529355 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
CTR9-204ENST00000529355 MT4P47944 62 aa0.3□□□□□ -2.36
CTR9-204ENST00000529355 KRTAP20-2Q3LI61 65 aa0.26□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms