RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
COPB1-206ENST00000529210 A0A1B0GU69 56 aa4.45□□□□□ -1.7
COPB1-206ENST00000529210 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
COPB1-206ENST00000529210 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
COPB1-206ENST00000529210 MT1GP13640 62 aa4.38□□□□□ -1.71
COPB1-206ENST00000529210 ATP5EP56381 51 aaPredicted RBP4.38□□□□□ -1.71
COPB1-206ENST00000529210 A8MU10 97 aa4.36□□□□□ -1.71
COPB1-206ENST00000529210 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
COPB1-206ENST00000529210 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
COPB1-206ENST00000529210 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
COPB1-206ENST00000529210 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
COPB1-206ENST00000529210 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
COPB1-206ENST00000529210 TNP1P09430 55 aa4.3□□□□□ -1.72
COPB1-206ENST00000529210 MT1LQ93083 61 aa4.3□□□□□ -1.72
COPB1-206ENST00000529210 MT1MQ8N339 61 aa4.28□□□□□ -1.72
COPB1-206ENST00000529210 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
COPB1-206ENST00000529210 TMEM258P61165 79 aa4.23□□□□□ -1.73
COPB1-206ENST00000529210 UQCR11O14957 56 aa4.2□□□□□ -1.74
COPB1-206ENST00000529210 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
COPB1-206ENST00000529210 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
COPB1-206ENST00000529210 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
COPB1-206ENST00000529210 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
COPB1-206ENST00000529210 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
COPB1-206ENST00000529210 MT4P47944 62 aa4.07□□□□□ -1.76
COPB1-206ENST00000529210 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
COPB1-206ENST00000529210 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
COPB1-206ENST00000529210 V9GYY9 64 aa4.03□□□□□ -1.76
COPB1-206ENST00000529210 K7ERS5 55 aa4□□□□□ -1.77
COPB1-206ENST00000529210 Q1T7F1 81 aa4□□□□□ -1.77
COPB1-206ENST00000529210 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
COPB1-206ENST00000529210 PSPHP1O15172 72 aa3.94□□□□□ -1.78
COPB1-206ENST00000529210 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
COPB1-206ENST00000529210 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
COPB1-206ENST00000529210 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
COPB1-206ENST00000529210 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
COPB1-206ENST00000529210 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
COPB1-206ENST00000529210 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
COPB1-206ENST00000529210 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
COPB1-206ENST00000529210 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
COPB1-206ENST00000529210 A6NED7 52 aa3.82□□□□□ -1.8
COPB1-206ENST00000529210 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
COPB1-206ENST00000529210 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
COPB1-206ENST00000529210 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
COPB1-206ENST00000529210 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
COPB1-206ENST00000529210 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
COPB1-206ENST00000529210 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
COPB1-206ENST00000529210 ROMO1P60602 79 aa3.73□□□□□ -1.81
COPB1-206ENST00000529210 MT3P25713 68 aa3.72□□□□□ -1.81
COPB1-206ENST00000529210 MT1AP04731 61 aa3.66□□□□□ -1.82
COPB1-206ENST00000529210 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
COPB1-206ENST00000529210 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
COPB1-206ENST00000529210 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
COPB1-206ENST00000529210 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
COPB1-206ENST00000529210 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
COPB1-206ENST00000529210 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
COPB1-206ENST00000529210 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
COPB1-206ENST00000529210 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
COPB1-206ENST00000529210 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
COPB1-206ENST00000529210 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
COPB1-206ENST00000529210 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
COPB1-206ENST00000529210 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
COPB1-206ENST00000529210 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
COPB1-206ENST00000529210 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
COPB1-206ENST00000529210 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
COPB1-206ENST00000529210 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
COPB1-206ENST00000529210 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
COPB1-206ENST00000529210 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
COPB1-206ENST00000529210 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
COPB1-206ENST00000529210 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
COPB1-206ENST00000529210 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
COPB1-206ENST00000529210 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
COPB1-206ENST00000529210 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
COPB1-206ENST00000529210 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
COPB1-206ENST00000529210 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
COPB1-206ENST00000529210 INE1O15225 51 aa1.94□□□□□ -2.1
COPB1-206ENST00000529210 PRM1P04553 51 aa1.88□□□□□ -2.11
COPB1-206ENST00000529210 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
COPB1-206ENST00000529210 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms