RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
CDC27-206ENST00000528748 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
CDC27-206ENST00000528748 KRTAP12-2P59991 146 aa4.47□□□□□ -1.69
CDC27-206ENST00000528748 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
CDC27-206ENST00000528748 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
CDC27-206ENST00000528748 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
CDC27-206ENST00000528748 A6NED7 52 aa4.37□□□□□ -1.71
CDC27-206ENST00000528748 KRTAP4-4Q9BYR3 166 aa4.37□□□□□ -1.71
CDC27-206ENST00000528748 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
CDC27-206ENST00000528748 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
CDC27-206ENST00000528748 K7ERS5 55 aa4.29□□□□□ -1.72
CDC27-206ENST00000528748 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
CDC27-206ENST00000528748 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
CDC27-206ENST00000528748 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
CDC27-206ENST00000528748 KMT2DO14686 5537 aa4.23□□□□□ -1.73
CDC27-206ENST00000528748 TNP1P09430 55 aa4.22□□□□□ -1.73
CDC27-206ENST00000528748 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
CDC27-206ENST00000528748 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
CDC27-206ENST00000528748 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
CDC27-206ENST00000528748 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
CDC27-206ENST00000528748 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
CDC27-206ENST00000528748 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
CDC27-206ENST00000528748 NEBP20929 6669 aa4.09□□□□□ -1.76
CDC27-206ENST00000528748 SPRR2EP22531 72 aa4.07□□□□□ -1.76
CDC27-206ENST00000528748 SPRR2BP35325 72 aa4.07□□□□□ -1.76
CDC27-206ENST00000528748 SPRR2AP35326 72 aa4.07□□□□□ -1.76
CDC27-206ENST00000528748 ROMO1P60602 79 aa4.07□□□□□ -1.76
CDC27-206ENST00000528748 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
CDC27-206ENST00000528748 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
CDC27-206ENST00000528748 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
CDC27-206ENST00000528748 MT1EP04732 61 aa4.04□□□□□ -1.76
CDC27-206ENST00000528748 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
CDC27-206ENST00000528748 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
CDC27-206ENST00000528748 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
CDC27-206ENST00000528748 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
CDC27-206ENST00000528748 SPRR2DP22532 72 aa3.93□□□□□ -1.78
CDC27-206ENST00000528748 MT1LQ93083 61 aa3.91□□□□□ -1.78
CDC27-206ENST00000528748 MT1GP13640 62 aa3.9□□□□□ -1.79
CDC27-206ENST00000528748 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
CDC27-206ENST00000528748 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
CDC27-206ENST00000528748 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
CDC27-206ENST00000528748 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
CDC27-206ENST00000528748 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
CDC27-206ENST00000528748 MT1MQ8N339 61 aa3.82□□□□□ -1.8
CDC27-206ENST00000528748 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
CDC27-206ENST00000528748 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
CDC27-206ENST00000528748 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
CDC27-206ENST00000528748 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
CDC27-206ENST00000528748 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CDC27-206ENST00000528748 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CDC27-206ENST00000528748 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
CDC27-206ENST00000528748 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
CDC27-206ENST00000528748 MT4P47944 62 aa3.41□□□□□ -1.86
CDC27-206ENST00000528748 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
CDC27-206ENST00000528748 MT1AP04731 61 aa3.33□□□□□ -1.88
CDC27-206ENST00000528748 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
CDC27-206ENST00000528748 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
CDC27-206ENST00000528748 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
CDC27-206ENST00000528748 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
CDC27-206ENST00000528748 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
CDC27-206ENST00000528748 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
CDC27-206ENST00000528748 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
CDC27-206ENST00000528748 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
CDC27-206ENST00000528748 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
CDC27-206ENST00000528748 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
CDC27-206ENST00000528748 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
CDC27-206ENST00000528748 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CDC27-206ENST00000528748 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
CDC27-206ENST00000528748 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
CDC27-206ENST00000528748 MUC5ACP98088 5654 aa2.56□□□□□ -2
CDC27-206ENST00000528748 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
CDC27-206ENST00000528748 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
CDC27-206ENST00000528748 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
CDC27-206ENST00000528748 INE1O15225 51 aa2.22□□□□□ -2.05
CDC27-206ENST00000528748 PRM1P04553 51 aa2.09□□□□□ -2.07
CDC27-206ENST00000528748 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CDC27-206ENST00000528748 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CDC27-206ENST00000528748 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 67.1 ms