RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SRPRA-203ENST00000528744 MT1LQ93083 61 aa4.11□□□□□ -1.75
SRPRA-203ENST00000528744 A0A1B0GU33 70 aa4.1□□□□□ -1.75
SRPRA-203ENST00000528744 MT4P47944 62 aa4.09□□□□□ -1.75
SRPRA-203ENST00000528744 SERP1Q9Y6X1 66 aa4.09□□□□□ -1.75
SRPRA-203ENST00000528744 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
SRPRA-203ENST00000528744 SEC61GP60059 68 aa4.06□□□□□ -1.76
SRPRA-203ENST00000528744 A8MU10 97 aa4.04□□□□□ -1.76
SRPRA-203ENST00000528744 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
SRPRA-203ENST00000528744 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
SRPRA-203ENST00000528744 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
SRPRA-203ENST00000528744 H7BZZ5 65 aa4.02□□□□□ -1.77
SRPRA-203ENST00000528744 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SRPRA-203ENST00000528744 COX7CP15954 63 aa4□□□□□ -1.77
SRPRA-203ENST00000528744 MT3P25713 68 aa3.96□□□□□ -1.78
SRPRA-203ENST00000528744 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
SRPRA-203ENST00000528744 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
SRPRA-203ENST00000528744 A0A1B0GU69 56 aa3.92□□□□□ -1.78
SRPRA-203ENST00000528744 TNP1P09430 55 aa3.91□□□□□ -1.78
SRPRA-203ENST00000528744 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
SRPRA-203ENST00000528744 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
SRPRA-203ENST00000528744 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SRPRA-203ENST00000528744 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
SRPRA-203ENST00000528744 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
SRPRA-203ENST00000528744 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
SRPRA-203ENST00000528744 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
SRPRA-203ENST00000528744 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SRPRA-203ENST00000528744 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
SRPRA-203ENST00000528744 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
SRPRA-203ENST00000528744 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
SRPRA-203ENST00000528744 ANAPC13Q9BS18 74 aa3.73□□□□□ -1.81
SRPRA-203ENST00000528744 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SRPRA-203ENST00000528744 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
SRPRA-203ENST00000528744 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
SRPRA-203ENST00000528744 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
SRPRA-203ENST00000528744 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SRPRA-203ENST00000528744 UQCR11O14957 56 aa3.61□□□□□ -1.83
SRPRA-203ENST00000528744 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
SRPRA-203ENST00000528744 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
SRPRA-203ENST00000528744 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
SRPRA-203ENST00000528744 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
SRPRA-203ENST00000528744 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
SRPRA-203ENST00000528744 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
SRPRA-203ENST00000528744 TMEM258P61165 79 aa3.49□□□□□ -1.85
SRPRA-203ENST00000528744 MT1AP04731 61 aa3.47□□□□□ -1.85
SRPRA-203ENST00000528744 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SRPRA-203ENST00000528744 PSPHP1O15172 72 aa3.43□□□□□ -1.86
SRPRA-203ENST00000528744 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
SRPRA-203ENST00000528744 K7ERS5 55 aa3.4□□□□□ -1.87
SRPRA-203ENST00000528744 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SRPRA-203ENST00000528744 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
SRPRA-203ENST00000528744 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
SRPRA-203ENST00000528744 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
SRPRA-203ENST00000528744 Q1T7F1 81 aa3.35□□□□□ -1.87
SRPRA-203ENST00000528744 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
SRPRA-203ENST00000528744 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SRPRA-203ENST00000528744 V9GYY9 64 aa3.29□□□□□ -1.88
SRPRA-203ENST00000528744 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
SRPRA-203ENST00000528744 A6NED7 52 aa3.24□□□□□ -1.89
SRPRA-203ENST00000528744 ROMO1P60602 79 aa3.24□□□□□ -1.89
SRPRA-203ENST00000528744 RPS28P62857 69 aaKnown RBP3.2□□□□□ -1.9
SRPRA-203ENST00000528744 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SRPRA-203ENST00000528744 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SRPRA-203ENST00000528744 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SRPRA-203ENST00000528744 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
SRPRA-203ENST00000528744 BRK1Q8WUW1 75 aa2.58□□□□□ -2
SRPRA-203ENST00000528744 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
SRPRA-203ENST00000528744 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
SRPRA-203ENST00000528744 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
SRPRA-203ENST00000528744 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
SRPRA-203ENST00000528744 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SRPRA-203ENST00000528744 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SRPRA-203ENST00000528744 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SRPRA-203ENST00000528744 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
SRPRA-203ENST00000528744 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SRPRA-203ENST00000528744 PRM1P04553 51 aa1.68□□□□□ -2.14
SRPRA-203ENST00000528744 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
SRPRA-203ENST00000528744 INE1O15225 51 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 139.8 ms