RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
RDX-205ENST00000528556 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
RDX-205ENST00000528556 USH2AO75445 5202 aa3.57□□□□□ -1.84
RDX-205ENST00000528556 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
RDX-205ENST00000528556 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
RDX-205ENST00000528556 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
RDX-205ENST00000528556 MT1XP80297 61 aa3.48□□□□□ -1.85
RDX-205ENST00000528556 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
RDX-205ENST00000528556 TNP1P09430 55 aa3.43□□□□□ -1.86
RDX-205ENST00000528556 ROMO1P60602 79 aa3.43□□□□□ -1.86
RDX-205ENST00000528556 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
RDX-205ENST00000528556 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
RDX-205ENST00000528556 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
RDX-205ENST00000528556 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
RDX-205ENST00000528556 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
RDX-205ENST00000528556 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
RDX-205ENST00000528556 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
RDX-205ENST00000528556 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
RDX-205ENST00000528556 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
RDX-205ENST00000528556 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
RDX-205ENST00000528556 KMT2DO14686 5537 aa3.31□□□□□ -1.88
RDX-205ENST00000528556 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
RDX-205ENST00000528556 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
RDX-205ENST00000528556 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
RDX-205ENST00000528556 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
RDX-205ENST00000528556 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
RDX-205ENST00000528556 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
RDX-205ENST00000528556 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
RDX-205ENST00000528556 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
RDX-205ENST00000528556 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
RDX-205ENST00000528556 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
RDX-205ENST00000528556 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
RDX-205ENST00000528556 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
RDX-205ENST00000528556 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
RDX-205ENST00000528556 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
RDX-205ENST00000528556 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
RDX-205ENST00000528556 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
RDX-205ENST00000528556 MT1EP04732 61 aa3.07□□□□□ -1.92
RDX-205ENST00000528556 SPRR2EP22531 72 aa3.07□□□□□ -1.92
RDX-205ENST00000528556 SPRR2BP35325 72 aa3.07□□□□□ -1.92
RDX-205ENST00000528556 SPRR2AP35326 72 aa3.07□□□□□ -1.92
RDX-205ENST00000528556 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
RDX-205ENST00000528556 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
RDX-205ENST00000528556 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
RDX-205ENST00000528556 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
RDX-205ENST00000528556 MT1LQ93083 61 aa2.99□□□□□ -1.93
RDX-205ENST00000528556 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
RDX-205ENST00000528556 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
RDX-205ENST00000528556 MT1GP13640 62 aa2.97□□□□□ -1.93
RDX-205ENST00000528556 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
RDX-205ENST00000528556 SPRR2DP22532 72 aa2.96□□□□□ -1.94
RDX-205ENST00000528556 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
RDX-205ENST00000528556 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
RDX-205ENST00000528556 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
RDX-205ENST00000528556 MT1MQ8N339 61 aa2.91□□□□□ -1.94
RDX-205ENST00000528556 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
RDX-205ENST00000528556 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
RDX-205ENST00000528556 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
RDX-205ENST00000528556 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
RDX-205ENST00000528556 MT4P47944 62 aa2.58□□□□□ -2
RDX-205ENST00000528556 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
RDX-205ENST00000528556 MT1AP04731 61 aa2.56□□□□□ -2
RDX-205ENST00000528556 KRTAP12-4P60329 112 aa2.56□□□□□ -2
RDX-205ENST00000528556 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
RDX-205ENST00000528556 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
RDX-205ENST00000528556 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
RDX-205ENST00000528556 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
RDX-205ENST00000528556 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
RDX-205ENST00000528556 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
RDX-205ENST00000528556 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
RDX-205ENST00000528556 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
RDX-205ENST00000528556 INE1O15225 51 aa2.06□□□□□ -2.08
RDX-205ENST00000528556 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
RDX-205ENST00000528556 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
RDX-205ENST00000528556 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
RDX-205ENST00000528556 PRM1P04553 51 aa1.77□□□□□ -2.13
RDX-205ENST00000528556 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
RDX-205ENST00000528556 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms