RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
ATG13-211ENST00000528494 MT1LQ93083 61 aa4.49□□□□□ -1.69
ATG13-211ENST00000528494 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
ATG13-211ENST00000528494 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
ATG13-211ENST00000528494 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
ATG13-211ENST00000528494 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
ATG13-211ENST00000528494 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
ATG13-211ENST00000528494 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
ATG13-211ENST00000528494 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
ATG13-211ENST00000528494 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
ATG13-211ENST00000528494 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
ATG13-211ENST00000528494 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
ATG13-211ENST00000528494 MT1GP13640 62 aa4.33□□□□□ -1.72
ATG13-211ENST00000528494 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
ATG13-211ENST00000528494 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
ATG13-211ENST00000528494 MT1MQ8N339 61 aa4.31□□□□□ -1.72
ATG13-211ENST00000528494 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
ATG13-211ENST00000528494 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
ATG13-211ENST00000528494 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
ATG13-211ENST00000528494 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
ATG13-211ENST00000528494 SPRR2EP22531 72 aa4.25□□□□□ -1.73
ATG13-211ENST00000528494 SPRR2BP35325 72 aa4.25□□□□□ -1.73
ATG13-211ENST00000528494 SPRR2AP35326 72 aa4.25□□□□□ -1.73
ATG13-211ENST00000528494 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
ATG13-211ENST00000528494 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
ATG13-211ENST00000528494 SPRR2DP22532 72 aa4.09□□□□□ -1.76
ATG13-211ENST00000528494 NEBP20929 6669 aa4.05□□□□□ -1.76
ATG13-211ENST00000528494 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
ATG13-211ENST00000528494 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
ATG13-211ENST00000528494 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
ATG13-211ENST00000528494 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
ATG13-211ENST00000528494 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
ATG13-211ENST00000528494 MT1AP04731 61 aa3.78□□□□□ -1.8
ATG13-211ENST00000528494 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
ATG13-211ENST00000528494 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
ATG13-211ENST00000528494 PRM1P04553 51 aa3.63□□□□□ -1.83
ATG13-211ENST00000528494 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
ATG13-211ENST00000528494 MT4P47944 62 aa3.62□□□□□ -1.83
ATG13-211ENST00000528494 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
ATG13-211ENST00000528494 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
ATG13-211ENST00000528494 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
ATG13-211ENST00000528494 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
ATG13-211ENST00000528494 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
ATG13-211ENST00000528494 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
ATG13-211ENST00000528494 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
ATG13-211ENST00000528494 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
ATG13-211ENST00000528494 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
ATG13-211ENST00000528494 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
ATG13-211ENST00000528494 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
ATG13-211ENST00000528494 MT3P25713 68 aa3.44□□□□□ -1.86
ATG13-211ENST00000528494 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
ATG13-211ENST00000528494 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
ATG13-211ENST00000528494 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
ATG13-211ENST00000528494 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
ATG13-211ENST00000528494 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
ATG13-211ENST00000528494 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
ATG13-211ENST00000528494 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
ATG13-211ENST00000528494 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
ATG13-211ENST00000528494 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
ATG13-211ENST00000528494 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
ATG13-211ENST00000528494 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
ATG13-211ENST00000528494 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.97
ATG13-211ENST00000528494 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
ATG13-211ENST00000528494 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
ATG13-211ENST00000528494 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
ATG13-211ENST00000528494 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
ATG13-211ENST00000528494 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
ATG13-211ENST00000528494 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
ATG13-211ENST00000528494 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
ATG13-211ENST00000528494 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
ATG13-211ENST00000528494 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
ATG13-211ENST00000528494 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
ATG13-211ENST00000528494 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
ATG13-211ENST00000528494 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
ATG13-211ENST00000528494 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
ATG13-211ENST00000528494 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
ATG13-211ENST00000528494 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 118.7 ms