RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 V9GYY9 64 aa5.44□□□□□ -1.54
CLNS1A-210ENST00000528364 PCP4P48539 62 aa5.43□□□□□ -1.54
CLNS1A-210ENST00000528364 SMIM26A0A096LP01 95 aa5.42□□□□□ -1.54
CLNS1A-210ENST00000528364 H3BS24 57 aa5.41□□□□□ -1.54
CLNS1A-210ENST00000528364 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
CLNS1A-210ENST00000528364 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
CLNS1A-210ENST00000528364 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
CLNS1A-210ENST00000528364 A8MU10 97 aa5.4□□□□□ -1.54
CLNS1A-210ENST00000528364 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
CLNS1A-210ENST00000528364 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
CLNS1A-210ENST00000528364 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
CLNS1A-210ENST00000528364 UQCR11O14957 56 aa5.32□□□□□ -1.56
CLNS1A-210ENST00000528364 TNP1P09430 55 aa5.31□□□□□ -1.56
CLNS1A-210ENST00000528364 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
CLNS1A-210ENST00000528364 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
CLNS1A-210ENST00000528364 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
CLNS1A-210ENST00000528364 K7ERS5 55 aa5.25□□□□□ -1.57
CLNS1A-210ENST00000528364 Q1T7F1 81 aa5.24□□□□□ -1.57
CLNS1A-210ENST00000528364 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
CLNS1A-210ENST00000528364 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
CLNS1A-210ENST00000528364 PSPHP1O15172 72 aa5.17□□□□□ -1.58
CLNS1A-210ENST00000528364 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
CLNS1A-210ENST00000528364 A6NED7 52 aa5.12□□□□□ -1.59
CLNS1A-210ENST00000528364 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
CLNS1A-210ENST00000528364 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
CLNS1A-210ENST00000528364 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
CLNS1A-210ENST00000528364 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
CLNS1A-210ENST00000528364 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
CLNS1A-210ENST00000528364 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
CLNS1A-210ENST00000528364 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
CLNS1A-210ENST00000528364 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
CLNS1A-210ENST00000528364 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
CLNS1A-210ENST00000528364 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
CLNS1A-210ENST00000528364 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
CLNS1A-210ENST00000528364 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
CLNS1A-210ENST00000528364 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CLNS1A-210ENST00000528364 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
CLNS1A-210ENST00000528364 ROMO1P60602 79 aa4.74□□□□□ -1.65
CLNS1A-210ENST00000528364 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
CLNS1A-210ENST00000528364 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
CLNS1A-210ENST00000528364 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
CLNS1A-210ENST00000528364 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
CLNS1A-210ENST00000528364 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
CLNS1A-210ENST00000528364 MT1AP04731 61 aa4.67□□□□□ -1.66
CLNS1A-210ENST00000528364 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
CLNS1A-210ENST00000528364 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
CLNS1A-210ENST00000528364 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
CLNS1A-210ENST00000528364 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
CLNS1A-210ENST00000528364 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
CLNS1A-210ENST00000528364 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
CLNS1A-210ENST00000528364 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
CLNS1A-210ENST00000528364 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
CLNS1A-210ENST00000528364 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
CLNS1A-210ENST00000528364 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
CLNS1A-210ENST00000528364 MT3P25713 68 aa4.27□□□□□ -1.73
CLNS1A-210ENST00000528364 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
CLNS1A-210ENST00000528364 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
CLNS1A-210ENST00000528364 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
CLNS1A-210ENST00000528364 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CLNS1A-210ENST00000528364 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CLNS1A-210ENST00000528364 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
CLNS1A-210ENST00000528364 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
CLNS1A-210ENST00000528364 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
CLNS1A-210ENST00000528364 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
CLNS1A-210ENST00000528364 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
CLNS1A-210ENST00000528364 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-210ENST00000528364 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CLNS1A-210ENST00000528364 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
CLNS1A-210ENST00000528364 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
CLNS1A-210ENST00000528364 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
CLNS1A-210ENST00000528364 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
CLNS1A-210ENST00000528364 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CLNS1A-210ENST00000528364 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CLNS1A-210ENST00000528364 INE1O15225 51 aa2.66□□□□□ -1.98
CLNS1A-210ENST00000528364 PRM1P04553 51 aa2.38□□□□□ -2.03
CLNS1A-210ENST00000528364 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CLNS1A-210ENST00000528364 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 56.1 ms