RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LCE5A	Q5TCM9	118 aa		4.35	□□□□□ -1.71
PSMC3-205	ENST00000528362	UQCR11	O14957	56 aa		4.34	□□□□□ -1.71
PSMC3-205	ENST00000528362	KRTAP19-3	Q7Z4W3	81 aa		4.34	□□□□□ -1.71
PSMC3-205	ENST00000528362	KRTAP19-5	Q3LI72	72 aa		4.32	□□□□□ -1.72
PSMC3-205	ENST00000528362	KRTAP4-9	Q9BYQ8	210 aa		4.31	□□□□□ -1.72
PSMC3-205	ENST00000528362	DST	Q03001	7570 aa	Known RBP	4.3	□□□□□ -1.72
PSMC3-205	ENST00000528362	C10orf95	Q9H7T3	257 aa		4.28	□□□□□ -1.72
PSMC3-205	ENST00000528362	MIR22HG	Q0VDD5	57 aa		4.27	□□□□□ -1.73
PSMC3-205	ENST00000528362	KRTAP4-2	Q9BYR5	136 aa		4.27	□□□□□ -1.73
PSMC3-205	ENST00000528362		A6NED7	52 aa		4.25	□□□□□ -1.73
PSMC3-205	ENST00000528362	LCE3A	Q5TA76	89 aa		4.24	□□□□□ -1.73
PSMC3-205	ENST00000528362	TNP1	P09430	55 aa		4.23	□□□□□ -1.73
PSMC3-205	ENST00000528362	MT1G	P13640	62 aa		4.22	□□□□□ -1.73
PSMC3-205	ENST00000528362	MT1L	Q93083	61 aa		4.2	□□□□□ -1.74
PSMC3-205	ENST00000528362		K7ERS5	55 aa		4.19	□□□□□ -1.74
PSMC3-205	ENST00000528362	PP632	Q6XCG6	107 aa		4.17	□□□□□ -1.74
PSMC3-205	ENST00000528362	MT1M	Q8N339	61 aa		4.17	□□□□□ -1.74
PSMC3-205	ENST00000528362	KRTAP4-11	Q9BYQ6	195 aa		4.12	□□□□□ -1.75
PSMC3-205	ENST00000528362	KRTAP4-3	Q9BYR4	195 aa		4.09	□□□□□ -1.75
PSMC3-205	ENST00000528362	CDC42SE1	Q9NRR8	79 aa		4.09	□□□□□ -1.75
PSMC3-205	ENST00000528362	HMCN1	Q96RW7	5635 aa		4.07	□□□□□ -1.76
PSMC3-205	ENST00000528362	KRTAP12-3	P60328	96 aa		4.06	□□□□□ -1.76
PSMC3-205	ENST00000528362	LCE4A	Q5TA78	99 aa		4.04	□□□□□ -1.76
PSMC3-205	ENST00000528362	KRTAP25-1	Q3LHN0	102 aa		4.01	□□□□□ -1.77
PSMC3-205	ENST00000528362	MT4	P47944	62 aa		3.98	□□□□□ -1.77
PSMC3-205	ENST00000528362	BRK1	Q8WUW1	75 aa		3.98	□□□□□ -1.77
PSMC3-205	ENST00000528362	AHNAK2	Q8IVF2	5795 aa		3.97	□□□□□ -1.77
PSMC3-205	ENST00000528362	KRTAP5-4	Q6L8H1	288 aa		3.97	□□□□□ -1.77
PSMC3-205	ENST00000528362	KRTAP5-3	Q6L8H2	238 aa		3.95	□□□□□ -1.78
PSMC3-205	ENST00000528362	SVIP	Q8NHG7	77 aa		3.95	□□□□□ -1.78
PSMC3-205	ENST00000528362	KRTAP5-10	Q6L8G5	202 aa		3.94	□□□□□ -1.78
PSMC3-205	ENST00000528362	ROMO1	P60602	79 aa		3.91	□□□□□ -1.78
PSMC3-205	ENST00000528362	KRTAP23-1	A1A580	65 aa		3.86	□□□□□ -1.79
PSMC3-205	ENST00000528362	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.84	□□□□□ -1.79
PSMC3-205	ENST00000528362	KRTAP5-7	Q6L8G8	165 aa		3.82	□□□□□ -1.8
PSMC3-205	ENST00000528362	KRTAP19-4	Q3LI73	84 aa		3.8	□□□□□ -1.8
PSMC3-205	ENST00000528362	KRTAP15-1	Q3LI76	137 aa		3.8	□□□□□ -1.8
PSMC3-205	ENST00000528362	PMAIP1	Q13794	54 aa		3.74	□□□□□ -1.81
PSMC3-205	ENST00000528362	KRTAP20-2	Q3LI61	65 aa		3.74	□□□□□ -1.81
PSMC3-205	ENST00000528362	LCE3C	Q5T5A8	94 aa		3.74	□□□□□ -1.81
PSMC3-205	ENST00000528362	SPRR5	A0A1B0GTR4	108 aa		3.71	□□□□□ -1.82
PSMC3-205	ENST00000528362	PRO0628	Q9UI54	55 aa		3.7	□□□□□ -1.82
PSMC3-205	ENST00000528362	KRTAP12-4	P60329	112 aa		3.69	□□□□□ -1.82
PSMC3-205	ENST00000528362	SYNE1	Q8NF91	8797 aa	Known RBP	3.64	□□□□□ -1.83
PSMC3-205	ENST00000528362	KRTAP9-6	A8MVA2	160 aa		3.56	□□□□□ -1.84
PSMC3-205	ENST00000528362	MT1A	P04731	61 aa		3.56	□□□□□ -1.84
PSMC3-205	ENST00000528362	KRTAP6-1	Q3LI64	71 aa		3.55	□□□□□ -1.84
PSMC3-205	ENST00000528362	PRAC1	Q96KF2	57 aa		3.52	□□□□□ -1.85
PSMC3-205	ENST00000528362	KRTAP5-2	Q701N4	177 aa		3.49	□□□□□ -1.85
PSMC3-205	ENST00000528362	KTN1-AS1	Q86SY8	53 aa		3.49	□□□□□ -1.85
PSMC3-205	ENST00000528362	KRTAP6-2	Q3LI66	62 aa		3.39	□□□□□ -1.87
PSMC3-205	ENST00000528362	MUC5AC	P98088	5654 aa		3.35	□□□□□ -1.87
PSMC3-205	ENST00000528362	AHNAK	Q09666	5890 aa	Known RBP	3.34	□□□□□ -1.87
PSMC3-205	ENST00000528362	KRTAP5-8	O75690	187 aa		3.34	□□□□□ -1.87
PSMC3-205	ENST00000528362	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.34	□□□□□ -1.88
PSMC3-205	ENST00000528362	OBSCN	Q5VST9	7968 aa		3.28	□□□□□ -1.89
PSMC3-205	ENST00000528362	MT3	P25713	68 aa		3.24	□□□□□ -1.89
PSMC3-205	ENST00000528362		H3BS24	57 aa		3.17	□□□□□ -1.9
PSMC3-205	ENST00000528362	KRTAP5-1	Q6L8H4	278 aa		3.13	□□□□□ -1.91
PSMC3-205	ENST00000528362	LCE1E	Q5T753	118 aa		2.99	□□□□□ -1.93
PSMC3-205	ENST00000528362	LUZP6	Q538Z0	58 aa		2.98	□□□□□ -1.93
PSMC3-205	ENST00000528362	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.92	□□□□□ -1.94
PSMC3-205	ENST00000528362	LCE1B	Q5T7P3	118 aa		2.81	□□□□□ -1.96
PSMC3-205	ENST00000528362	KRTAP5-11	Q6L8G4	156 aa		2.78	□□□□□ -1.96
PSMC3-205	ENST00000528362	LCE1C	Q5T751	118 aa		2.77	□□□□□ -1.97
PSMC3-205	ENST00000528362	LCE3D	Q9BYE3	92 aa		2.69	□□□□□ -1.98
PSMC3-205	ENST00000528362	NDUFAF8	A1L188	74 aa		2.66	□□□□□ -1.98
PSMC3-205	ENST00000528362	LCE3E	Q5T5B0	92 aa		2.53	□□□□□ -2
PSMC3-205	ENST00000528362	KRTAP4-4	Q9BYR3	166 aa		2.44	□□□□□ -2.02
PSMC3-205	ENST00000528362	LCE1F	Q5T754	118 aa		2.41	□□□□□ -2.02
PSMC3-205	ENST00000528362	KRTAP21-2	Q3LI59	83 aa		2.34	□□□□□ -2.03
PSMC3-205	ENST00000528362		A0A0A0MQY5	61 aa		2.3	□□□□□ -2.04
PSMC3-205	ENST00000528362	PHGR1	C9JFL3	82 aa		2.28	□□□□□ -2.04
PSMC3-205	ENST00000528362	INE1	O15225	51 aa		2.19	□□□□□ -2.06
PSMC3-205	ENST00000528362	PRM1	P04553	51 aa		2.02	□□□□□ -2.09
PSMC3-205	ENST00000528362	MUC19	Q7Z5P9	8384 aa		2	□□□□□ -2.09
PSMC3-205	ENST00000528362	KRTAP21-1	Q3LI58	79 aa		1.74	□□□□□ -2.13
PSMC3-205	ENST00000528362	MUC16	Q8WXI7	14507 aa		1.39	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 101.4 ms