RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
TRAPPC4-209ENST00000528230 TMEM258P61165 79 aa4.51□□□□□ -1.69
TRAPPC4-209ENST00000528230 MT1EP04732 61 aa4.5□□□□□ -1.69
TRAPPC4-209ENST00000528230 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
TRAPPC4-209ENST00000528230 TNP1P09430 55 aa4.43□□□□□ -1.7
TRAPPC4-209ENST00000528230 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
TRAPPC4-209ENST00000528230 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
TRAPPC4-209ENST00000528230 UQCR11O14957 56 aa4.41□□□□□ -1.7
TRAPPC4-209ENST00000528230 MT1GP13640 62 aa4.39□□□□□ -1.71
TRAPPC4-209ENST00000528230 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
TRAPPC4-209ENST00000528230 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
TRAPPC4-209ENST00000528230 MT1LQ93083 61 aa4.31□□□□□ -1.72
TRAPPC4-209ENST00000528230 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
TRAPPC4-209ENST00000528230 V9GYY9 64 aa4.29□□□□□ -1.72
TRAPPC4-209ENST00000528230 MT1MQ8N339 61 aa4.28□□□□□ -1.72
TRAPPC4-209ENST00000528230 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
TRAPPC4-209ENST00000528230 Q1T7F1 81 aa4.25□□□□□ -1.73
TRAPPC4-209ENST00000528230 K7ERS5 55 aa4.23□□□□□ -1.73
TRAPPC4-209ENST00000528230 PSPHP1O15172 72 aa4.21□□□□□ -1.74
TRAPPC4-209ENST00000528230 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
TRAPPC4-209ENST00000528230 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
TRAPPC4-209ENST00000528230 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
TRAPPC4-209ENST00000528230 A6NED7 52 aa4.08□□□□□ -1.76
TRAPPC4-209ENST00000528230 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
TRAPPC4-209ENST00000528230 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
TRAPPC4-209ENST00000528230 MT4P47944 62 aa4.05□□□□□ -1.76
TRAPPC4-209ENST00000528230 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
TRAPPC4-209ENST00000528230 PCP4P48539 62 aa3.98□□□□□ -1.77
TRAPPC4-209ENST00000528230 ROMO1P60602 79 aa3.93□□□□□ -1.78
TRAPPC4-209ENST00000528230 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC4-209ENST00000528230 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
TRAPPC4-209ENST00000528230 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
TRAPPC4-209ENST00000528230 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC4-209ENST00000528230 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
TRAPPC4-209ENST00000528230 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
TRAPPC4-209ENST00000528230 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
TRAPPC4-209ENST00000528230 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
TRAPPC4-209ENST00000528230 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
TRAPPC4-209ENST00000528230 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
TRAPPC4-209ENST00000528230 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
TRAPPC4-209ENST00000528230 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
TRAPPC4-209ENST00000528230 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
TRAPPC4-209ENST00000528230 MT1AP04731 61 aa3.68□□□□□ -1.82
TRAPPC4-209ENST00000528230 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
TRAPPC4-209ENST00000528230 MT3P25713 68 aa3.64□□□□□ -1.83
TRAPPC4-209ENST00000528230 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
TRAPPC4-209ENST00000528230 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
TRAPPC4-209ENST00000528230 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
TRAPPC4-209ENST00000528230 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
TRAPPC4-209ENST00000528230 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
TRAPPC4-209ENST00000528230 SVIPQ8NHG7 77 aa3.46□□□□□ -1.86
TRAPPC4-209ENST00000528230 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
TRAPPC4-209ENST00000528230 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
TRAPPC4-209ENST00000528230 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
TRAPPC4-209ENST00000528230 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
TRAPPC4-209ENST00000528230 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
TRAPPC4-209ENST00000528230 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
TRAPPC4-209ENST00000528230 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
TRAPPC4-209ENST00000528230 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
TRAPPC4-209ENST00000528230 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
TRAPPC4-209ENST00000528230 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC4-209ENST00000528230 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
TRAPPC4-209ENST00000528230 A0A0A0MQY5 61 aa3□□□□□ -1.93
TRAPPC4-209ENST00000528230 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
TRAPPC4-209ENST00000528230 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
TRAPPC4-209ENST00000528230 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
TRAPPC4-209ENST00000528230 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
TRAPPC4-209ENST00000528230 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
TRAPPC4-209ENST00000528230 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
TRAPPC4-209ENST00000528230 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
TRAPPC4-209ENST00000528230 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
TRAPPC4-209ENST00000528230 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
TRAPPC4-209ENST00000528230 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
TRAPPC4-209ENST00000528230 PRM1P04553 51 aa1.99□□□□□ -2.09
TRAPPC4-209ENST00000528230 INE1O15225 51 aa1.77□□□□□ -2.13
TRAPPC4-209ENST00000528230 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
TRAPPC4-209ENST00000528230 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 140 ms