RNA–Protein interactions for RNA: ENST00000528145.5

ATG13-210, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-210ENST00000528145 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
ATG13-210ENST00000528145 A6NED7 52 aa5.14□□□□□ -1.59
ATG13-210ENST00000528145 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
ATG13-210ENST00000528145 K7ERS5 55 aa5.07□□□□□ -1.6
ATG13-210ENST00000528145 SPRR2EP22531 72 aa5.07□□□□□ -1.6
ATG13-210ENST00000528145 SPRR2BP35325 72 aa5.07□□□□□ -1.6
ATG13-210ENST00000528145 SPRR2AP35326 72 aa5.07□□□□□ -1.6
ATG13-210ENST00000528145 TNP1P09430 55 aa5.06□□□□□ -1.6
ATG13-210ENST00000528145 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
ATG13-210ENST00000528145 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
ATG13-210ENST00000528145 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
ATG13-210ENST00000528145 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
ATG13-210ENST00000528145 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
ATG13-210ENST00000528145 MT1EP04732 61 aa4.96□□□□□ -1.62
ATG13-210ENST00000528145 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
ATG13-210ENST00000528145 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
ATG13-210ENST00000528145 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
ATG13-210ENST00000528145 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
ATG13-210ENST00000528145 SPRR2DP22532 72 aa4.89□□□□□ -1.63
ATG13-210ENST00000528145 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
ATG13-210ENST00000528145 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
ATG13-210ENST00000528145 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
ATG13-210ENST00000528145 ROMO1P60602 79 aa4.81□□□□□ -1.64
ATG13-210ENST00000528145 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
ATG13-210ENST00000528145 MT1LQ93083 61 aa4.78□□□□□ -1.64
ATG13-210ENST00000528145 MT1GP13640 62 aa4.74□□□□□ -1.65
ATG13-210ENST00000528145 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
ATG13-210ENST00000528145 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
ATG13-210ENST00000528145 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
ATG13-210ENST00000528145 MT1MQ8N339 61 aa4.7□□□□□ -1.66
ATG13-210ENST00000528145 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
ATG13-210ENST00000528145 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
ATG13-210ENST00000528145 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
ATG13-210ENST00000528145 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
ATG13-210ENST00000528145 MT3P25713 68 aa4.58□□□□□ -1.68
ATG13-210ENST00000528145 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
ATG13-210ENST00000528145 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
ATG13-210ENST00000528145 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
ATG13-210ENST00000528145 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
ATG13-210ENST00000528145 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
ATG13-210ENST00000528145 MT4P47944 62 aa4.26□□□□□ -1.73
ATG13-210ENST00000528145 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
ATG13-210ENST00000528145 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
ATG13-210ENST00000528145 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
ATG13-210ENST00000528145 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
ATG13-210ENST00000528145 MT1AP04731 61 aa4.07□□□□□ -1.76
ATG13-210ENST00000528145 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
ATG13-210ENST00000528145 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
ATG13-210ENST00000528145 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
ATG13-210ENST00000528145 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
ATG13-210ENST00000528145 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
ATG13-210ENST00000528145 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
ATG13-210ENST00000528145 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
ATG13-210ENST00000528145 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
ATG13-210ENST00000528145 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
ATG13-210ENST00000528145 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
ATG13-210ENST00000528145 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
ATG13-210ENST00000528145 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
ATG13-210ENST00000528145 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
ATG13-210ENST00000528145 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
ATG13-210ENST00000528145 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
ATG13-210ENST00000528145 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
ATG13-210ENST00000528145 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
ATG13-210ENST00000528145 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
ATG13-210ENST00000528145 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
ATG13-210ENST00000528145 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ATG13-210ENST00000528145 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
ATG13-210ENST00000528145 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
ATG13-210ENST00000528145 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
ATG13-210ENST00000528145 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
ATG13-210ENST00000528145 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
ATG13-210ENST00000528145 INE1O15225 51 aa2.99□□□□□ -1.93
ATG13-210ENST00000528145 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
ATG13-210ENST00000528145 PRM1P04553 51 aa2.49□□□□□ -2.01
ATG13-210ENST00000528145 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
ATG13-210ENST00000528145 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
ATG13-210ENST00000528145 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
ATG13-210ENST00000528145 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms