RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 A8MU10 97 aa4.68□□□□□ -1.66
SDHD-205ENST00000528048 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
SDHD-205ENST00000528048 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
SDHD-205ENST00000528048 MT3P25713 68 aa4.66□□□□□ -1.66
SDHD-205ENST00000528048 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SDHD-205ENST00000528048 UQCR11O14957 56 aa4.61□□□□□ -1.67
SDHD-205ENST00000528048 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
SDHD-205ENST00000528048 V9GYY9 64 aa4.56□□□□□ -1.68
SDHD-205ENST00000528048 TNP1P09430 55 aa4.55□□□□□ -1.68
SDHD-205ENST00000528048 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
SDHD-205ENST00000528048 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
SDHD-205ENST00000528048 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
SDHD-205ENST00000528048 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
SDHD-205ENST00000528048 MT1EP04732 61 aa4.49□□□□□ -1.69
SDHD-205ENST00000528048 K7ERS5 55 aa4.48□□□□□ -1.69
SDHD-205ENST00000528048 PSPHP1O15172 72 aa4.47□□□□□ -1.69
SDHD-205ENST00000528048 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
SDHD-205ENST00000528048 Q1T7F1 81 aa4.46□□□□□ -1.7
SDHD-205ENST00000528048 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
SDHD-205ENST00000528048 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
SDHD-205ENST00000528048 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
SDHD-205ENST00000528048 PCP4P48539 62 aa4.4□□□□□ -1.71
SDHD-205ENST00000528048 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
SDHD-205ENST00000528048 MT1GP13640 62 aa4.38□□□□□ -1.71
SDHD-205ENST00000528048 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
SDHD-205ENST00000528048 A6NED7 52 aa4.36□□□□□ -1.71
SDHD-205ENST00000528048 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
SDHD-205ENST00000528048 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
SDHD-205ENST00000528048 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
SDHD-205ENST00000528048 MT1LQ93083 61 aa4.3□□□□□ -1.72
SDHD-205ENST00000528048 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SDHD-205ENST00000528048 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SDHD-205ENST00000528048 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
SDHD-205ENST00000528048 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
SDHD-205ENST00000528048 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
SDHD-205ENST00000528048 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
SDHD-205ENST00000528048 ROMO1P60602 79 aa4.13□□□□□ -1.75
SDHD-205ENST00000528048 MT4P47944 62 aa4.03□□□□□ -1.76
SDHD-205ENST00000528048 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
SDHD-205ENST00000528048 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
SDHD-205ENST00000528048 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
SDHD-205ENST00000528048 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
SDHD-205ENST00000528048 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SDHD-205ENST00000528048 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
SDHD-205ENST00000528048 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
SDHD-205ENST00000528048 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
SDHD-205ENST00000528048 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
SDHD-205ENST00000528048 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
SDHD-205ENST00000528048 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
SDHD-205ENST00000528048 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SDHD-205ENST00000528048 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
SDHD-205ENST00000528048 MT1AP04731 61 aa3.67□□□□□ -1.82
SDHD-205ENST00000528048 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
SDHD-205ENST00000528048 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
SDHD-205ENST00000528048 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
SDHD-205ENST00000528048 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
SDHD-205ENST00000528048 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SDHD-205ENST00000528048 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
SDHD-205ENST00000528048 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SDHD-205ENST00000528048 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
SDHD-205ENST00000528048 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
SDHD-205ENST00000528048 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
SDHD-205ENST00000528048 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SDHD-205ENST00000528048 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SDHD-205ENST00000528048 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
SDHD-205ENST00000528048 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
SDHD-205ENST00000528048 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
SDHD-205ENST00000528048 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SDHD-205ENST00000528048 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
SDHD-205ENST00000528048 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SDHD-205ENST00000528048 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
SDHD-205ENST00000528048 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SDHD-205ENST00000528048 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
SDHD-205ENST00000528048 INE1O15225 51 aa2.09□□□□□ -2.07
SDHD-205ENST00000528048 PRM1P04553 51 aa2.09□□□□□ -2.07
SDHD-205ENST00000528048 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SDHD-205ENST00000528048 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 57.9 ms