RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
LINC00958-203ENST00000527945 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
LINC00958-203ENST00000527945 A8MU10 97 aa3.62□□□□□ -1.83
LINC00958-203ENST00000527945 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
LINC00958-203ENST00000527945 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
LINC00958-203ENST00000527945 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
LINC00958-203ENST00000527945 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
LINC00958-203ENST00000527945 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
LINC00958-203ENST00000527945 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
LINC00958-203ENST00000527945 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
LINC00958-203ENST00000527945 SPRR2DP22532 72 aa3.52□□□□□ -1.85
LINC00958-203ENST00000527945 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
LINC00958-203ENST00000527945 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
LINC00958-203ENST00000527945 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
LINC00958-203ENST00000527945 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
LINC00958-203ENST00000527945 UQCR11O14957 56 aa3.45□□□□□ -1.86
LINC00958-203ENST00000527945 Q1T7F1 81 aa3.45□□□□□ -1.86
LINC00958-203ENST00000527945 PSPHP1O15172 72 aa3.44□□□□□ -1.86
LINC00958-203ENST00000527945 MT1EP04732 61 aa3.42□□□□□ -1.86
LINC00958-203ENST00000527945 TNP1P09430 55 aa3.42□□□□□ -1.86
LINC00958-203ENST00000527945 RPS28P62857 69 aaKnown RBP3.42□□□□□ -1.86
LINC00958-203ENST00000527945 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
LINC00958-203ENST00000527945 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
LINC00958-203ENST00000527945 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.87
LINC00958-203ENST00000527945 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
LINC00958-203ENST00000527945 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
LINC00958-203ENST00000527945 MT1GP13640 62 aa3.35□□□□□ -1.87
LINC00958-203ENST00000527945 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
LINC00958-203ENST00000527945 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
LINC00958-203ENST00000527945 K7ERS5 55 aa3.32□□□□□ -1.88
LINC00958-203ENST00000527945 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
LINC00958-203ENST00000527945 MT1LQ93083 61 aa3.29□□□□□ -1.88
LINC00958-203ENST00000527945 A6NED7 52 aa3.28□□□□□ -1.88
LINC00958-203ENST00000527945 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
LINC00958-203ENST00000527945 MT1MQ8N339 61 aa3.24□□□□□ -1.89
LINC00958-203ENST00000527945 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
LINC00958-203ENST00000527945 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
LINC00958-203ENST00000527945 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
LINC00958-203ENST00000527945 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
LINC00958-203ENST00000527945 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
LINC00958-203ENST00000527945 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
LINC00958-203ENST00000527945 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
LINC00958-203ENST00000527945 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
LINC00958-203ENST00000527945 ROMO1P60602 79 aa3.11□□□□□ -1.91
LINC00958-203ENST00000527945 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
LINC00958-203ENST00000527945 MT4P47944 62 aa3.05□□□□□ -1.92
LINC00958-203ENST00000527945 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
LINC00958-203ENST00000527945 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
LINC00958-203ENST00000527945 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
LINC00958-203ENST00000527945 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
LINC00958-203ENST00000527945 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
LINC00958-203ENST00000527945 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
LINC00958-203ENST00000527945 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
LINC00958-203ENST00000527945 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
LINC00958-203ENST00000527945 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
LINC00958-203ENST00000527945 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
LINC00958-203ENST00000527945 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
LINC00958-203ENST00000527945 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
LINC00958-203ENST00000527945 MT1AP04731 61 aa2.81□□□□□ -1.96
LINC00958-203ENST00000527945 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
LINC00958-203ENST00000527945 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
LINC00958-203ENST00000527945 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
LINC00958-203ENST00000527945 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
LINC00958-203ENST00000527945 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
LINC00958-203ENST00000527945 MT3P25713 68 aa2.59□□□□□ -1.99
LINC00958-203ENST00000527945 INE1O15225 51 aa2.31□□□□□ -2.04
LINC00958-203ENST00000527945 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
LINC00958-203ENST00000527945 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
LINC00958-203ENST00000527945 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
LINC00958-203ENST00000527945 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
LINC00958-203ENST00000527945 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
LINC00958-203ENST00000527945 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
LINC00958-203ENST00000527945 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
LINC00958-203ENST00000527945 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
LINC00958-203ENST00000527945 PRM1P04553 51 aa1.64□□□□□ -2.15
LINC00958-203ENST00000527945 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
LINC00958-203ENST00000527945 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 44.4 ms