RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-222ENST00000527718 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
PABPC4-222ENST00000527718 MT3P25713 68 aa2.78□□□□□ -1.96
PABPC4-222ENST00000527718 TNP1P09430 55 aa2.76□□□□□ -1.97
PABPC4-222ENST00000527718 MT2AP02795 61 aa2.75□□□□□ -1.97
PABPC4-222ENST00000527718 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
PABPC4-222ENST00000527718 INE1O15225 51 aa2.73□□□□□ -1.97
PABPC4-222ENST00000527718 MT1FP04733 61 aa2.71□□□□□ -1.98
PABPC4-222ENST00000527718 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
PABPC4-222ENST00000527718 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
PABPC4-222ENST00000527718 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
PABPC4-222ENST00000527718 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
PABPC4-222ENST00000527718 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
PABPC4-222ENST00000527718 MT1BP07438 61 aa2.57□□□□□ -2
PABPC4-222ENST00000527718 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
PABPC4-222ENST00000527718 KRTAP10-12P60413 245 aa2.55□□□□□ -2
PABPC4-222ENST00000527718 USH2AO75445 5202 aa2.54□□□□□ -2
PABPC4-222ENST00000527718 MT1XP80297 61 aa2.52□□□□□ -2.01
PABPC4-222ENST00000527718 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
PABPC4-222ENST00000527718 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
PABPC4-222ENST00000527718 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
PABPC4-222ENST00000527718 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
PABPC4-222ENST00000527718 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
PABPC4-222ENST00000527718 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
PABPC4-222ENST00000527718 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
PABPC4-222ENST00000527718 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
PABPC4-222ENST00000527718 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
PABPC4-222ENST00000527718 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
PABPC4-222ENST00000527718 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
PABPC4-222ENST00000527718 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
PABPC4-222ENST00000527718 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
PABPC4-222ENST00000527718 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
PABPC4-222ENST00000527718 MT1EP04732 61 aa2.24□□□□□ -2.05
PABPC4-222ENST00000527718 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
PABPC4-222ENST00000527718 MT1GP13640 62 aa2.22□□□□□ -2.05
PABPC4-222ENST00000527718 MT1LQ93083 61 aa2.2□□□□□ -2.06
PABPC4-222ENST00000527718 NEBP20929 6669 aa2.19□□□□□ -2.06
PABPC4-222ENST00000527718 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
PABPC4-222ENST00000527718 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
PABPC4-222ENST00000527718 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
PABPC4-222ENST00000527718 KMT2DO14686 5537 aa2.18□□□□□ -2.06
PABPC4-222ENST00000527718 SPRR2EP22531 72 aa2.14□□□□□ -2.07
PABPC4-222ENST00000527718 SPRR2BP35325 72 aa2.14□□□□□ -2.07
PABPC4-222ENST00000527718 SPRR2AP35326 72 aa2.14□□□□□ -2.07
PABPC4-222ENST00000527718 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
PABPC4-222ENST00000527718 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
PABPC4-222ENST00000527718 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
PABPC4-222ENST00000527718 MT1MQ8N339 61 aa2.1□□□□□ -2.07
PABPC4-222ENST00000527718 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
PABPC4-222ENST00000527718 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.07
PABPC4-222ENST00000527718 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
PABPC4-222ENST00000527718 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
PABPC4-222ENST00000527718 SPRR2DP22532 72 aa2.06□□□□□ -2.08
PABPC4-222ENST00000527718 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
PABPC4-222ENST00000527718 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
PABPC4-222ENST00000527718 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
PABPC4-222ENST00000527718 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
PABPC4-222ENST00000527718 MT1AP04731 61 aa1.91□□□□□ -2.1
PABPC4-222ENST00000527718 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
PABPC4-222ENST00000527718 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
PABPC4-222ENST00000527718 MT4P47944 62 aa1.79□□□□□ -2.12
PABPC4-222ENST00000527718 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
PABPC4-222ENST00000527718 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
PABPC4-222ENST00000527718 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
PABPC4-222ENST00000527718 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
PABPC4-222ENST00000527718 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
PABPC4-222ENST00000527718 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
PABPC4-222ENST00000527718 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
PABPC4-222ENST00000527718 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
PABPC4-222ENST00000527718 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
PABPC4-222ENST00000527718 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
PABPC4-222ENST00000527718 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
PABPC4-222ENST00000527718 PRM1P04553 51 aa1.46□□□□□ -2.18
PABPC4-222ENST00000527718 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
PABPC4-222ENST00000527718 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
PABPC4-222ENST00000527718 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
PABPC4-222ENST00000527718 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
PABPC4-222ENST00000527718 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
PABPC4-222ENST00000527718 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 254 ms