RNA–Protein interactions for RNA: ENST00000527691.5

GPATCH4-213, Transcript of G-patch domain containing 4, humanhuman

TSL 4

Gene GPATCH4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-213ENST00000527691 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
GPATCH4-213ENST00000527691 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
GPATCH4-213ENST00000527691 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
GPATCH4-213ENST00000527691 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
GPATCH4-213ENST00000527691 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
GPATCH4-213ENST00000527691 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
GPATCH4-213ENST00000527691 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
GPATCH4-213ENST00000527691 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
GPATCH4-213ENST00000527691 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
GPATCH4-213ENST00000527691 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
GPATCH4-213ENST00000527691 KMT2DO14686 5537 aa4.4□□□□□ -1.71
GPATCH4-213ENST00000527691 MT1EP04732 61 aa4.36□□□□□ -1.71
GPATCH4-213ENST00000527691 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
GPATCH4-213ENST00000527691 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
GPATCH4-213ENST00000527691 MT1LQ93083 61 aa4.27□□□□□ -1.73
GPATCH4-213ENST00000527691 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
GPATCH4-213ENST00000527691 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
GPATCH4-213ENST00000527691 NEBP20929 6669 aa4.19□□□□□ -1.74
GPATCH4-213ENST00000527691 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
GPATCH4-213ENST00000527691 MT1GP13640 62 aa4.18□□□□□ -1.74
GPATCH4-213ENST00000527691 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
GPATCH4-213ENST00000527691 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.74
GPATCH4-213ENST00000527691 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
GPATCH4-213ENST00000527691 SPRR2EP22531 72 aa4.12□□□□□ -1.75
GPATCH4-213ENST00000527691 SPRR2BP35325 72 aa4.12□□□□□ -1.75
GPATCH4-213ENST00000527691 SPRR2AP35326 72 aa4.12□□□□□ -1.75
GPATCH4-213ENST00000527691 MT1MQ8N339 61 aa4.1□□□□□ -1.75
GPATCH4-213ENST00000527691 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
GPATCH4-213ENST00000527691 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
GPATCH4-213ENST00000527691 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
GPATCH4-213ENST00000527691 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
GPATCH4-213ENST00000527691 NDUFAF8A1L188 74 aa4□□□□□ -1.77
GPATCH4-213ENST00000527691 SPRR2DP22532 72 aa3.98□□□□□ -1.77
GPATCH4-213ENST00000527691 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
GPATCH4-213ENST00000527691 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
GPATCH4-213ENST00000527691 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
GPATCH4-213ENST00000527691 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
GPATCH4-213ENST00000527691 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
GPATCH4-213ENST00000527691 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
GPATCH4-213ENST00000527691 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
GPATCH4-213ENST00000527691 MT1AP04731 61 aa3.65□□□□□ -1.83
GPATCH4-213ENST00000527691 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
GPATCH4-213ENST00000527691 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
GPATCH4-213ENST00000527691 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
GPATCH4-213ENST00000527691 MT4P47944 62 aa3.49□□□□□ -1.85
GPATCH4-213ENST00000527691 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
GPATCH4-213ENST00000527691 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
GPATCH4-213ENST00000527691 INE1O15225 51 aa3.4□□□□□ -1.87
GPATCH4-213ENST00000527691 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
GPATCH4-213ENST00000527691 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
GPATCH4-213ENST00000527691 MT3P25713 68 aa3.31□□□□□ -1.88
GPATCH4-213ENST00000527691 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
GPATCH4-213ENST00000527691 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
GPATCH4-213ENST00000527691 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
GPATCH4-213ENST00000527691 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
GPATCH4-213ENST00000527691 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
GPATCH4-213ENST00000527691 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
GPATCH4-213ENST00000527691 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
GPATCH4-213ENST00000527691 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
GPATCH4-213ENST00000527691 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
GPATCH4-213ENST00000527691 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
GPATCH4-213ENST00000527691 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
GPATCH4-213ENST00000527691 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
GPATCH4-213ENST00000527691 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
GPATCH4-213ENST00000527691 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
GPATCH4-213ENST00000527691 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
GPATCH4-213ENST00000527691 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
GPATCH4-213ENST00000527691 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
GPATCH4-213ENST00000527691 PRM1P04553 51 aa2.68□□□□□ -1.98
GPATCH4-213ENST00000527691 MUC5ACP98088 5654 aa2.65□□□□□ -1.98
GPATCH4-213ENST00000527691 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
GPATCH4-213ENST00000527691 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -2
GPATCH4-213ENST00000527691 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
GPATCH4-213ENST00000527691 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
GPATCH4-213ENST00000527691 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
GPATCH4-213ENST00000527691 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
GPATCH4-213ENST00000527691 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
GPATCH4-213ENST00000527691 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 34.3 ms