RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 MT1GP13640 62 aa6.1□□□□□ -1.43
NR1H3-229ENST00000527464 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
NR1H3-229ENST00000527464 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
NR1H3-229ENST00000527464 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
NR1H3-229ENST00000527464 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
NR1H3-229ENST00000527464 K7ERS5 55 aa6.02□□□□□ -1.45
NR1H3-229ENST00000527464 MT1LQ93083 61 aa6.02□□□□□ -1.45
NR1H3-229ENST00000527464 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
NR1H3-229ENST00000527464 MT1MQ8N339 61 aa5.97□□□□□ -1.45
NR1H3-229ENST00000527464 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
NR1H3-229ENST00000527464 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
NR1H3-229ENST00000527464 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
NR1H3-229ENST00000527464 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
NR1H3-229ENST00000527464 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
NR1H3-229ENST00000527464 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
NR1H3-229ENST00000527464 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
NR1H3-229ENST00000527464 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
NR1H3-229ENST00000527464 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
NR1H3-229ENST00000527464 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
NR1H3-229ENST00000527464 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
NR1H3-229ENST00000527464 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.5
NR1H3-229ENST00000527464 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
NR1H3-229ENST00000527464 ROMO1P60602 79 aa5.6□□□□□ -1.51
NR1H3-229ENST00000527464 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
NR1H3-229ENST00000527464 MT4P47944 62 aa5.59□□□□□ -1.51
NR1H3-229ENST00000527464 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
NR1H3-229ENST00000527464 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
NR1H3-229ENST00000527464 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
NR1H3-229ENST00000527464 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
NR1H3-229ENST00000527464 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
NR1H3-229ENST00000527464 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
NR1H3-229ENST00000527464 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
NR1H3-229ENST00000527464 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
NR1H3-229ENST00000527464 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
NR1H3-229ENST00000527464 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
NR1H3-229ENST00000527464 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
NR1H3-229ENST00000527464 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
NR1H3-229ENST00000527464 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
NR1H3-229ENST00000527464 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
NR1H3-229ENST00000527464 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
NR1H3-229ENST00000527464 MT1AP04731 61 aa5.14□□□□□ -1.59
NR1H3-229ENST00000527464 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
NR1H3-229ENST00000527464 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
NR1H3-229ENST00000527464 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
NR1H3-229ENST00000527464 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
NR1H3-229ENST00000527464 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
NR1H3-229ENST00000527464 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
NR1H3-229ENST00000527464 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
NR1H3-229ENST00000527464 MT3P25713 68 aa4.71□□□□□ -1.66
NR1H3-229ENST00000527464 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
NR1H3-229ENST00000527464 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
NR1H3-229ENST00000527464 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
NR1H3-229ENST00000527464 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
NR1H3-229ENST00000527464 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
NR1H3-229ENST00000527464 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
NR1H3-229ENST00000527464 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
NR1H3-229ENST00000527464 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
NR1H3-229ENST00000527464 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
NR1H3-229ENST00000527464 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
NR1H3-229ENST00000527464 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
NR1H3-229ENST00000527464 LCE1CQ5T751 118 aa4□□□□□ -1.77
NR1H3-229ENST00000527464 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
NR1H3-229ENST00000527464 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
NR1H3-229ENST00000527464 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
NR1H3-229ENST00000527464 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
NR1H3-229ENST00000527464 H3BS24 57 aa3.73□□□□□ -1.81
NR1H3-229ENST00000527464 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
NR1H3-229ENST00000527464 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
NR1H3-229ENST00000527464 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
NR1H3-229ENST00000527464 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
NR1H3-229ENST00000527464 INE1O15225 51 aa3.48□□□□□ -1.85
NR1H3-229ENST00000527464 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
NR1H3-229ENST00000527464 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
NR1H3-229ENST00000527464 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
NR1H3-229ENST00000527464 PRM1P04553 51 aa2.9□□□□□ -1.95
NR1H3-229ENST00000527464 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
NR1H3-229ENST00000527464 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
NR1H3-229ENST00000527464 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 1938.4 ms