RNA–Protein interactions for RNA: ENST00000527356.1

CCDC84-204, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-204ENST00000527356 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
CCDC84-204ENST00000527356 MT1BP07438 61 aa3.48□□□□□ -1.85
CCDC84-204ENST00000527356 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
CCDC84-204ENST00000527356 MT1XP80297 61 aa3.48□□□□□ -1.85
CCDC84-204ENST00000527356 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
CCDC84-204ENST00000527356 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
CCDC84-204ENST00000527356 INE1O15225 51 aa3.4□□□□□ -1.87
CCDC84-204ENST00000527356 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
CCDC84-204ENST00000527356 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
CCDC84-204ENST00000527356 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.89
CCDC84-204ENST00000527356 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
CCDC84-204ENST00000527356 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
CCDC84-204ENST00000527356 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.89
CCDC84-204ENST00000527356 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
CCDC84-204ENST00000527356 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
CCDC84-204ENST00000527356 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
CCDC84-204ENST00000527356 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
CCDC84-204ENST00000527356 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
CCDC84-204ENST00000527356 USH2AO75445 5202 aa3.14□□□□□ -1.91
CCDC84-204ENST00000527356 NEBP20929 6669 aa3.14□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
CCDC84-204ENST00000527356 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
CCDC84-204ENST00000527356 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CCDC84-204ENST00000527356 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
CCDC84-204ENST00000527356 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
CCDC84-204ENST00000527356 MT1LQ93083 61 aa3.02□□□□□ -1.93
CCDC84-204ENST00000527356 MT1EP04732 61 aa3.01□□□□□ -1.93
CCDC84-204ENST00000527356 KMT2DO14686 5537 aa2.97□□□□□ -1.93
CCDC84-204ENST00000527356 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
CCDC84-204ENST00000527356 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CCDC84-204ENST00000527356 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CCDC84-204ENST00000527356 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
CCDC84-204ENST00000527356 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
CCDC84-204ENST00000527356 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
CCDC84-204ENST00000527356 MT1GP13640 62 aa2.8□□□□□ -1.96
CCDC84-204ENST00000527356 MT1MQ8N339 61 aa2.8□□□□□ -1.96
CCDC84-204ENST00000527356 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
CCDC84-204ENST00000527356 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
CCDC84-204ENST00000527356 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
CCDC84-204ENST00000527356 MT3P25713 68 aa2.74□□□□□ -1.97
CCDC84-204ENST00000527356 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
CCDC84-204ENST00000527356 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
CCDC84-204ENST00000527356 MT1AP04731 61 aa2.64□□□□□ -1.99
CCDC84-204ENST00000527356 SPRR2EP22531 72 aa2.64□□□□□ -1.99
CCDC84-204ENST00000527356 SPRR2BP35325 72 aa2.64□□□□□ -1.99
CCDC84-204ENST00000527356 SPRR2AP35326 72 aa2.64□□□□□ -1.99
CCDC84-204ENST00000527356 SPRR2FQ96RM1 72 aa2.59□□□□□ -2
CCDC84-204ENST00000527356 SPRR2DP22532 72 aa2.56□□□□□ -2
CCDC84-204ENST00000527356 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
CCDC84-204ENST00000527356 LCE1FQ5T754 118 aa2.54□□□□□ -2
CCDC84-204ENST00000527356 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
CCDC84-204ENST00000527356 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
CCDC84-204ENST00000527356 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
CCDC84-204ENST00000527356 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
CCDC84-204ENST00000527356 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
CCDC84-204ENST00000527356 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
CCDC84-204ENST00000527356 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
CCDC84-204ENST00000527356 PRM1P04553 51 aa2.4□□□□□ -2.03
CCDC84-204ENST00000527356 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
CCDC84-204ENST00000527356 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
CCDC84-204ENST00000527356 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
CCDC84-204ENST00000527356 MT4P47944 62 aa2.26□□□□□ -2.05
CCDC84-204ENST00000527356 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
CCDC84-204ENST00000527356 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
CCDC84-204ENST00000527356 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
CCDC84-204ENST00000527356 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
CCDC84-204ENST00000527356 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
CCDC84-204ENST00000527356 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
CCDC84-204ENST00000527356 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CCDC84-204ENST00000527356 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CCDC84-204ENST00000527356 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
CCDC84-204ENST00000527356 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
CCDC84-204ENST00000527356 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms