RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
CAPN1-208ENST00000527323 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
CAPN1-208ENST00000527323 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
CAPN1-208ENST00000527323 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
CAPN1-208ENST00000527323 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
CAPN1-208ENST00000527323 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
CAPN1-208ENST00000527323 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
CAPN1-208ENST00000527323 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
CAPN1-208ENST00000527323 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
CAPN1-208ENST00000527323 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
CAPN1-208ENST00000527323 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
CAPN1-208ENST00000527323 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
CAPN1-208ENST00000527323 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
CAPN1-208ENST00000527323 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
CAPN1-208ENST00000527323 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
CAPN1-208ENST00000527323 MT1LQ93083 61 aa4.25□□□□□ -1.73
CAPN1-208ENST00000527323 MT1EP04732 61 aa4.21□□□□□ -1.74
CAPN1-208ENST00000527323 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
CAPN1-208ENST00000527323 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
CAPN1-208ENST00000527323 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
CAPN1-208ENST00000527323 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
CAPN1-208ENST00000527323 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
CAPN1-208ENST00000527323 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
CAPN1-208ENST00000527323 MT1GP13640 62 aa4.05□□□□□ -1.76
CAPN1-208ENST00000527323 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
CAPN1-208ENST00000527323 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
CAPN1-208ENST00000527323 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
CAPN1-208ENST00000527323 SPRR2EP22531 72 aa4□□□□□ -1.77
CAPN1-208ENST00000527323 SPRR2BP35325 72 aa4□□□□□ -1.77
CAPN1-208ENST00000527323 SPRR2AP35326 72 aa4□□□□□ -1.77
CAPN1-208ENST00000527323 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CAPN1-208ENST00000527323 MT1MQ8N339 61 aa3.96□□□□□ -1.77
CAPN1-208ENST00000527323 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
CAPN1-208ENST00000527323 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
CAPN1-208ENST00000527323 KRTAP5-9P26371 169 aa3.9□□□□□ -1.78
CAPN1-208ENST00000527323 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
CAPN1-208ENST00000527323 SPRR2DP22532 72 aa3.82□□□□□ -1.8
CAPN1-208ENST00000527323 NEBP20929 6669 aa3.81□□□□□ -1.8
CAPN1-208ENST00000527323 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
CAPN1-208ENST00000527323 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
CAPN1-208ENST00000527323 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
CAPN1-208ENST00000527323 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
CAPN1-208ENST00000527323 MT1AP04731 61 aa3.61□□□□□ -1.83
CAPN1-208ENST00000527323 MT4P47944 62 aa3.52□□□□□ -1.85
CAPN1-208ENST00000527323 PRM1P04553 51 aa3.5□□□□□ -1.85
CAPN1-208ENST00000527323 MT3P25713 68 aa3.49□□□□□ -1.85
CAPN1-208ENST00000527323 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
CAPN1-208ENST00000527323 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
CAPN1-208ENST00000527323 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
CAPN1-208ENST00000527323 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
CAPN1-208ENST00000527323 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CAPN1-208ENST00000527323 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
CAPN1-208ENST00000527323 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
CAPN1-208ENST00000527323 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
CAPN1-208ENST00000527323 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.9
CAPN1-208ENST00000527323 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
CAPN1-208ENST00000527323 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
CAPN1-208ENST00000527323 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
CAPN1-208ENST00000527323 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
CAPN1-208ENST00000527323 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
CAPN1-208ENST00000527323 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
CAPN1-208ENST00000527323 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
CAPN1-208ENST00000527323 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
CAPN1-208ENST00000527323 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
CAPN1-208ENST00000527323 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
CAPN1-208ENST00000527323 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CAPN1-208ENST00000527323 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
CAPN1-208ENST00000527323 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
CAPN1-208ENST00000527323 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
CAPN1-208ENST00000527323 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
CAPN1-208ENST00000527323 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CAPN1-208ENST00000527323 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.05
CAPN1-208ENST00000527323 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
CAPN1-208ENST00000527323 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
CAPN1-208ENST00000527323 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
CAPN1-208ENST00000527323 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
CAPN1-208ENST00000527323 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 35.1 ms