RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, human

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-231	ENST00000527203		A0A1B0GU33	70 aa		4.1	□□□□□ -1.75
FGFR1-231	ENST00000527203	MT1G	P13640	62 aa		4.1	□□□□□ -1.75
FGFR1-231	ENST00000527203	MT4	P47944	62 aa		4.1	□□□□□ -1.75
FGFR1-231	ENST00000527203	MT1M	Q8N339	61 aa		4.09	□□□□□ -1.75
FGFR1-231	ENST00000527203	PP632	Q6XCG6	107 aa		4.07	□□□□□ -1.76
FGFR1-231	ENST00000527203	MT1L	Q93083	61 aa		4.07	□□□□□ -1.76
FGFR1-231	ENST00000527203	KRTAP4-3	Q9BYR4	195 aa		4.07	□□□□□ -1.76
FGFR1-231	ENST00000527203	HMCN1	Q96RW7	5635 aa		4.04	□□□□□ -1.76
FGFR1-231	ENST00000527203		A8MU10	97 aa		4.04	□□□□□ -1.76
FGFR1-231	ENST00000527203	LCE3A	Q5TA76	89 aa		4.03	□□□□□ -1.76
FGFR1-231	ENST00000527203	C10orf95	Q9H7T3	257 aa		4.02	□□□□□ -1.77
FGFR1-231	ENST00000527203	COX7C	P15954	63 aa		4	□□□□□ -1.77
FGFR1-231	ENST00000527203		H7BZZ5	65 aa		3.99	□□□□□ -1.77
FGFR1-231	ENST00000527203		A0A1B0GU69	56 aa		3.97	□□□□□ -1.77
FGFR1-231	ENST00000527203	SMIM26	A0A096LP01	95 aa		3.95	□□□□□ -1.78
FGFR1-231	ENST00000527203	AHNAK2	Q8IVF2	5795 aa		3.94	□□□□□ -1.78
FGFR1-231	ENST00000527203	KRTAP5-4	Q6L8H1	288 aa		3.94	□□□□□ -1.78
FGFR1-231	ENST00000527203	TNP1	P09430	55 aa		3.92	□□□□□ -1.78
FGFR1-231	ENST00000527203	KRTAP5-10	Q6L8G5	202 aa		3.89	□□□□□ -1.79
FGFR1-231	ENST00000527203	KRTAP12-3	P60328	96 aa		3.83	□□□□□ -1.8
FGFR1-231	ENST00000527203	NDUFAF8	A1L188	74 aa		3.82	□□□□□ -1.8
FGFR1-231	ENST00000527203	PRAC1	Q96KF2	57 aa		3.82	□□□□□ -1.8
FGFR1-231	ENST00000527203	LCE1E	Q5T753	118 aa		3.8	□□□□□ -1.8
FGFR1-231	ENST00000527203	ANAPC13	Q9BS18	74 aa		3.79	□□□□□ -1.8
FGFR1-231	ENST00000527203	CCDC179	H3BU77	68 aa		3.77	□□□□□ -1.81
FGFR1-231	ENST00000527203	KRTAP20-2	Q3LI61	65 aa		3.77	□□□□□ -1.81
FGFR1-231	ENST00000527203	PRR15L	Q9BU68	103 aa		3.76	□□□□□ -1.81
FGFR1-231	ENST00000527203	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.75	□□□□□ -1.81
FGFR1-231	ENST00000527203	KRTAP5-7	Q6L8G8	165 aa		3.73	□□□□□ -1.81
FGFR1-231	ENST00000527203	LINC01558	Q9Y6Z2	57 aa		3.71	□□□□□ -1.82
FGFR1-231	ENST00000527203	SPRR5	A0A1B0GTR4	108 aa		3.67	□□□□□ -1.82
FGFR1-231	ENST00000527203	LCE1F	Q5T754	118 aa		3.67	□□□□□ -1.82
FGFR1-231	ENST00000527203	ATP5E	P56381	51 aa	Predicted RBP	3.66	□□□□□ -1.82
FGFR1-231	ENST00000527203	SYNE1	Q8NF91	8797 aa	Known RBP	3.64	□□□□□ -1.83
FGFR1-231	ENST00000527203	UQCR11	O14957	56 aa		3.64	□□□□□ -1.83
FGFR1-231	ENST00000527203	KRTAP12-4	P60329	112 aa		3.64	□□□□□ -1.83
FGFR1-231	ENST00000527203	KRTAP5-11	Q6L8G4	156 aa		3.62	□□□□□ -1.83
FGFR1-231	ENST00000527203	KRTAP25-1	Q3LHN0	102 aa		3.61	□□□□□ -1.83
FGFR1-231	ENST00000527203	MIR22HG	Q0VDD5	57 aa		3.57	□□□□□ -1.84
FGFR1-231	ENST00000527203	TMEM258	P61165	79 aa		3.53	□□□□□ -1.84
FGFR1-231	ENST00000527203	LCE3C	Q5T5A8	94 aa		3.51	□□□□□ -1.85
FGFR1-231	ENST00000527203	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.51	□□□□□ -1.85
FGFR1-231	ENST00000527203		K7ERS5	55 aa		3.49	□□□□□ -1.85
FGFR1-231	ENST00000527203	PSPHP1	O15172	72 aa		3.47	□□□□□ -1.85
FGFR1-231	ENST00000527203	KRTAP6-1	Q3LI64	71 aa		3.47	□□□□□ -1.85
FGFR1-231	ENST00000527203	MT1A	P04731	61 aa		3.44	□□□□□ -1.86
FGFR1-231	ENST00000527203	KRTAP5-2	Q701N4	177 aa		3.43	□□□□□ -1.86
FGFR1-231	ENST00000527203	KRTAP9-6	A8MVA2	160 aa		3.37	□□□□□ -1.87
FGFR1-231	ENST00000527203	KRTAP5-8	O75690	187 aa		3.36	□□□□□ -1.87
FGFR1-231	ENST00000527203	KRTAP6-2	Q3LI66	62 aa		3.34	□□□□□ -1.87
FGFR1-231	ENST00000527203		Q1T7F1	81 aa		3.33	□□□□□ -1.88
FGFR1-231	ENST00000527203		V9GYY9	64 aa		3.33	□□□□□ -1.88
FGFR1-231	ENST00000527203	CDC42SE1	Q9NRR8	79 aa		3.32	□□□□□ -1.88
FGFR1-231	ENST00000527203		A6NED7	52 aa		3.31	□□□□□ -1.88
FGFR1-231	ENST00000527203	OBSCN	Q5VST9	7968 aa		3.28	□□□□□ -1.88
FGFR1-231	ENST00000527203	MUC5AC	P98088	5654 aa		3.27	□□□□□ -1.89
FGFR1-231	ENST00000527203	ROMO1	P60602	79 aa		3.26	□□□□□ -1.89
FGFR1-231	ENST00000527203	RPS28	P62857	69 aa	Known RBP	3.26	□□□□□ -1.89
FGFR1-231	ENST00000527203	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.24	□□□□□ -1.89
FGFR1-231	ENST00000527203	AHNAK	Q09666	5890 aa	Known RBP	3.24	□□□□□ -1.89
FGFR1-231	ENST00000527203	KRTAP5-1	Q6L8H4	278 aa		3.12	□□□□□ -1.91
FGFR1-231	ENST00000527203	LCE3E	Q5T5B0	92 aa		3.11	□□□□□ -1.91
FGFR1-231	ENST00000527203	BRK1	Q8WUW1	75 aa		2.9	□□□□□ -1.95
FGFR1-231	ENST00000527203	KRTAP4-4	Q9BYR3	166 aa		2.88	□□□□□ -1.95
FGFR1-231	ENST00000527203	PRO0628	Q9UI54	55 aa		2.83	□□□□□ -1.96
FGFR1-231	ENST00000527203	LCE1B	Q5T7P3	118 aa		2.82	□□□□□ -1.96
FGFR1-231	ENST00000527203	PMAIP1	Q13794	54 aa		2.73	□□□□□ -1.97
FGFR1-231	ENST00000527203	LCE1C	Q5T751	118 aa		2.68	□□□□□ -1.98
FGFR1-231	ENST00000527203	KTN1-AS1	Q86SY8	53 aa		2.6	□□□□□ -1.99
FGFR1-231	ENST00000527203	LCE3D	Q9BYE3	92 aa		2.56	□□□□□ -2
FGFR1-231	ENST00000527203	PHGR1	C9JFL3	82 aa		2.29	□□□□□ -2.04
FGFR1-231	ENST00000527203	KRTAP21-2	Q3LI59	83 aa		2.27	□□□□□ -2.05
FGFR1-231	ENST00000527203	LUZP6	Q538Z0	58 aa		2.19	□□□□□ -2.06
FGFR1-231	ENST00000527203	MUC19	Q7Z5P9	8384 aa		2.03	□□□□□ -2.09
FGFR1-231	ENST00000527203	INE1	O15225	51 aa		1.83	□□□□□ -2.12
FGFR1-231	ENST00000527203	PRM1	P04553	51 aa		1.7	□□□□□ -2.14
FGFR1-231	ENST00000527203	KRTAP21-1	Q3LI58	79 aa		1.69	□□□□□ -2.14
FGFR1-231	ENST00000527203	MUC16	Q8WXI7	14507 aa		1.44	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms