RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
SMCO4-204ENST00000527149 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
SMCO4-204ENST00000527149 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
SMCO4-204ENST00000527149 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
SMCO4-204ENST00000527149 MT1GP13640 62 aa5.91□□□□□ -1.46
SMCO4-204ENST00000527149 BRK1Q8WUW1 75 aa5.9□□□□□ -1.46
SMCO4-204ENST00000527149 MT1MQ8N339 61 aa5.86□□□□□ -1.47
SMCO4-204ENST00000527149 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
SMCO4-204ENST00000527149 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
SMCO4-204ENST00000527149 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
SMCO4-204ENST00000527149 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
SMCO4-204ENST00000527149 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
SMCO4-204ENST00000527149 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
SMCO4-204ENST00000527149 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
SMCO4-204ENST00000527149 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
SMCO4-204ENST00000527149 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
SMCO4-204ENST00000527149 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
SMCO4-204ENST00000527149 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
SMCO4-204ENST00000527149 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
SMCO4-204ENST00000527149 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
SMCO4-204ENST00000527149 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
SMCO4-204ENST00000527149 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
SMCO4-204ENST00000527149 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
SMCO4-204ENST00000527149 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
SMCO4-204ENST00000527149 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
SMCO4-204ENST00000527149 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
SMCO4-204ENST00000527149 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
SMCO4-204ENST00000527149 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
SMCO4-204ENST00000527149 MT4P47944 62 aa5.24□□□□□ -1.57
SMCO4-204ENST00000527149 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
SMCO4-204ENST00000527149 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
SMCO4-204ENST00000527149 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.6
SMCO4-204ENST00000527149 MT1AP04731 61 aa5.07□□□□□ -1.6
SMCO4-204ENST00000527149 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
SMCO4-204ENST00000527149 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
SMCO4-204ENST00000527149 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SMCO4-204ENST00000527149 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
SMCO4-204ENST00000527149 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
SMCO4-204ENST00000527149 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
SMCO4-204ENST00000527149 GPR98Q8WXG9 6306 aa4.9□□□□□ -1.62
SMCO4-204ENST00000527149 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
SMCO4-204ENST00000527149 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
SMCO4-204ENST00000527149 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
SMCO4-204ENST00000527149 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
SMCO4-204ENST00000527149 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
SMCO4-204ENST00000527149 MT3P25713 68 aa4.58□□□□□ -1.68
SMCO4-204ENST00000527149 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
SMCO4-204ENST00000527149 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
SMCO4-204ENST00000527149 H3BS24 57 aa4.49□□□□□ -1.69
SMCO4-204ENST00000527149 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SMCO4-204ENST00000527149 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
SMCO4-204ENST00000527149 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SMCO4-204ENST00000527149 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
SMCO4-204ENST00000527149 MUC5ACP98088 5654 aa4.21□□□□□ -1.73
SMCO4-204ENST00000527149 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
SMCO4-204ENST00000527149 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
SMCO4-204ENST00000527149 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
SMCO4-204ENST00000527149 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
SMCO4-204ENST00000527149 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
SMCO4-204ENST00000527149 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
SMCO4-204ENST00000527149 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
SMCO4-204ENST00000527149 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SMCO4-204ENST00000527149 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
SMCO4-204ENST00000527149 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
SMCO4-204ENST00000527149 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
SMCO4-204ENST00000527149 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
SMCO4-204ENST00000527149 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SMCO4-204ENST00000527149 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
SMCO4-204ENST00000527149 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
SMCO4-204ENST00000527149 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
SMCO4-204ENST00000527149 INE1O15225 51 aa3.15□□□□□ -1.91
SMCO4-204ENST00000527149 PRM1P04553 51 aa3.11□□□□□ -1.91
SMCO4-204ENST00000527149 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
SMCO4-204ENST00000527149 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
SMCO4-204ENST00000527149 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
SMCO4-204ENST00000527149 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
SMCO4-204ENST00000527149 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 120.3 ms