RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 KRTAP4-9Q9BYQ8 210 aa7.11□□□□□ -1.27
CAPN1-206ENST00000526966 ROMO1P60602 79 aa7.1□□□□□ -1.27
CAPN1-206ENST00000526966 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
CAPN1-206ENST00000526966 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
CAPN1-206ENST00000526966 KRTAP19-3Q7Z4W3 81 aa7.04□□□□□ -1.28
CAPN1-206ENST00000526966 MT1EP04732 61 aa7.02□□□□□ -1.29
CAPN1-206ENST00000526966 A0A0D9SG42 100 aa6.98□□□□□ -1.29
CAPN1-206ENST00000526966 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
CAPN1-206ENST00000526966 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
CAPN1-206ENST00000526966 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
CAPN1-206ENST00000526966 HMCN1Q96RW7 5635 aa6.88□□□□□ -1.31
CAPN1-206ENST00000526966 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
CAPN1-206ENST00000526966 MT1GP13640 62 aa6.82□□□□□ -1.32
CAPN1-206ENST00000526966 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
CAPN1-206ENST00000526966 AHNAK2Q8IVF2 5795 aa6.79□□□□□ -1.32
CAPN1-206ENST00000526966 MT4P47944 62 aa6.77□□□□□ -1.33
CAPN1-206ENST00000526966 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
CAPN1-206ENST00000526966 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
CAPN1-206ENST00000526966 MT1MQ8N339 61 aa6.71□□□□□ -1.34
CAPN1-206ENST00000526966 KRTAP5-10Q6L8G5 202 aa6.65□□□□□ -1.34
CAPN1-206ENST00000526966 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
CAPN1-206ENST00000526966 MT1LQ93083 61 aa6.64□□□□□ -1.35
CAPN1-206ENST00000526966 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
CAPN1-206ENST00000526966 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
CAPN1-206ENST00000526966 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
CAPN1-206ENST00000526966 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
CAPN1-206ENST00000526966 TNP1P09430 55 aa6.43□□□□□ -1.38
CAPN1-206ENST00000526966 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
CAPN1-206ENST00000526966 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
CAPN1-206ENST00000526966 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
CAPN1-206ENST00000526966 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
CAPN1-206ENST00000526966 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
CAPN1-206ENST00000526966 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
CAPN1-206ENST00000526966 H3BS24 57 aa6.24□□□□□ -1.41
CAPN1-206ENST00000526966 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
CAPN1-206ENST00000526966 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
CAPN1-206ENST00000526966 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
CAPN1-206ENST00000526966 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
CAPN1-206ENST00000526966 NDUFAF8A1L188 74 aa6.09□□□□□ -1.43
CAPN1-206ENST00000526966 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
CAPN1-206ENST00000526966 LUZP6Q538Z0 58 aa5.98□□□□□ -1.45
CAPN1-206ENST00000526966 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
CAPN1-206ENST00000526966 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
CAPN1-206ENST00000526966 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
CAPN1-206ENST00000526966 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
CAPN1-206ENST00000526966 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
CAPN1-206ENST00000526966 MUC5ACP98088 5654 aa5.65□□□□□ -1.5
CAPN1-206ENST00000526966 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
CAPN1-206ENST00000526966 MT1AP04731 61 aa5.65□□□□□ -1.5
CAPN1-206ENST00000526966 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
CAPN1-206ENST00000526966 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
CAPN1-206ENST00000526966 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
CAPN1-206ENST00000526966 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
CAPN1-206ENST00000526966 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
CAPN1-206ENST00000526966 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CAPN1-206ENST00000526966 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
CAPN1-206ENST00000526966 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
CAPN1-206ENST00000526966 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
CAPN1-206ENST00000526966 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
CAPN1-206ENST00000526966 INE1O15225 51 aa5.22□□□□□ -1.57
CAPN1-206ENST00000526966 MT3P25713 68 aa5.16□□□□□ -1.58
CAPN1-206ENST00000526966 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
CAPN1-206ENST00000526966 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
CAPN1-206ENST00000526966 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
CAPN1-206ENST00000526966 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
CAPN1-206ENST00000526966 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
CAPN1-206ENST00000526966 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
CAPN1-206ENST00000526966 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CAPN1-206ENST00000526966 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
CAPN1-206ENST00000526966 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
CAPN1-206ENST00000526966 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CAPN1-206ENST00000526966 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
CAPN1-206ENST00000526966 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
CAPN1-206ENST00000526966 PRM1P04553 51 aa3.67□□□□□ -1.82
CAPN1-206ENST00000526966 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CAPN1-206ENST00000526966 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
CAPN1-206ENST00000526966 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
CAPN1-206ENST00000526966 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 119 ms