RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
SMCO4-203ENST00000526869 GPR98Q8WXG9 6306 aa7.34□□□□□ -1.23
SMCO4-203ENST00000526869 MT1LQ93083 61 aa7.31□□□□□ -1.24
SMCO4-203ENST00000526869 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
SMCO4-203ENST00000526869 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
SMCO4-203ENST00000526869 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
SMCO4-203ENST00000526869 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
SMCO4-203ENST00000526869 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
SMCO4-203ENST00000526869 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
SMCO4-203ENST00000526869 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
SMCO4-203ENST00000526869 MT1GP13640 62 aa7.14□□□□□ -1.27
SMCO4-203ENST00000526869 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SMCO4-203ENST00000526869 MDN1Q9NU22 5596 aa7.05□□□□□ -1.28
SMCO4-203ENST00000526869 MT1MQ8N339 61 aa7.03□□□□□ -1.28
SMCO4-203ENST00000526869 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
SMCO4-203ENST00000526869 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SMCO4-203ENST00000526869 SPRR2EP22531 72 aa6.95□□□□□ -1.3
SMCO4-203ENST00000526869 SPRR2BP35325 72 aa6.95□□□□□ -1.3
SMCO4-203ENST00000526869 SPRR2AP35326 72 aa6.95□□□□□ -1.3
SMCO4-203ENST00000526869 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
SMCO4-203ENST00000526869 KRTAP2-2Q9BYT5 123 aa6.93□□□□□ -1.3
SMCO4-203ENST00000526869 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
SMCO4-203ENST00000526869 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
SMCO4-203ENST00000526869 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
SMCO4-203ENST00000526869 SPRR2DP22532 72 aa6.71□□□□□ -1.34
SMCO4-203ENST00000526869 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
SMCO4-203ENST00000526869 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
SMCO4-203ENST00000526869 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
SMCO4-203ENST00000526869 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.38
SMCO4-203ENST00000526869 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
SMCO4-203ENST00000526869 MT1AP04731 61 aa6.24□□□□□ -1.41
SMCO4-203ENST00000526869 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.42
SMCO4-203ENST00000526869 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
SMCO4-203ENST00000526869 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
SMCO4-203ENST00000526869 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
SMCO4-203ENST00000526869 KRTAP5-7Q6L8G8 165 aa6.11□□□□□ -1.43
SMCO4-203ENST00000526869 KRTAP5-4Q6L8H1 288 aa6.11□□□□□ -1.43
SMCO4-203ENST00000526869 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SMCO4-203ENST00000526869 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
SMCO4-203ENST00000526869 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
SMCO4-203ENST00000526869 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
SMCO4-203ENST00000526869 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
SMCO4-203ENST00000526869 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
SMCO4-203ENST00000526869 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
SMCO4-203ENST00000526869 H3BS24 57 aa5.78□□□□□ -1.48
SMCO4-203ENST00000526869 MT4P47944 62 aa5.76□□□□□ -1.49
SMCO4-203ENST00000526869 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
SMCO4-203ENST00000526869 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
SMCO4-203ENST00000526869 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
SMCO4-203ENST00000526869 MT3P25713 68 aa5.65□□□□□ -1.5
SMCO4-203ENST00000526869 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
SMCO4-203ENST00000526869 INE1O15225 51 aa5.62□□□□□ -1.51
SMCO4-203ENST00000526869 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
SMCO4-203ENST00000526869 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
SMCO4-203ENST00000526869 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
SMCO4-203ENST00000526869 MUC5ACP98088 5654 aa5.33□□□□□ -1.56
SMCO4-203ENST00000526869 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
SMCO4-203ENST00000526869 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
SMCO4-203ENST00000526869 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
SMCO4-203ENST00000526869 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
SMCO4-203ENST00000526869 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
SMCO4-203ENST00000526869 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
SMCO4-203ENST00000526869 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
SMCO4-203ENST00000526869 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
SMCO4-203ENST00000526869 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
SMCO4-203ENST00000526869 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
SMCO4-203ENST00000526869 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
SMCO4-203ENST00000526869 PRM1P04553 51 aa4.54□□□□□ -1.68
SMCO4-203ENST00000526869 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SMCO4-203ENST00000526869 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
SMCO4-203ENST00000526869 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
SMCO4-203ENST00000526869 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
SMCO4-203ENST00000526869 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SMCO4-203ENST00000526869 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
SMCO4-203ENST00000526869 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
SMCO4-203ENST00000526869 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
SMCO4-203ENST00000526869 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
SMCO4-203ENST00000526869 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 817.5 ms