RNA–Protein interactions for RNA: ENST00000526673.1

SOX6-207, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-207ENST00000526673 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
SOX6-207ENST00000526673 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
SOX6-207ENST00000526673 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
SOX6-207ENST00000526673 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
SOX6-207ENST00000526673 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
SOX6-207ENST00000526673 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
SOX6-207ENST00000526673 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
SOX6-207ENST00000526673 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
SOX6-207ENST00000526673 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
SOX6-207ENST00000526673 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
SOX6-207ENST00000526673 KMT2DO14686 5537 aa3.43□□□□□ -1.86
SOX6-207ENST00000526673 MT1EP04732 61 aa3.43□□□□□ -1.86
SOX6-207ENST00000526673 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
SOX6-207ENST00000526673 MT1LQ93083 61 aa3.36□□□□□ -1.87
SOX6-207ENST00000526673 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
SOX6-207ENST00000526673 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
SOX6-207ENST00000526673 MT1GP13640 62 aa3.29□□□□□ -1.88
SOX6-207ENST00000526673 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
SOX6-207ENST00000526673 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
SOX6-207ENST00000526673 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
SOX6-207ENST00000526673 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
SOX6-207ENST00000526673 MT1MQ8N339 61 aa3.21□□□□□ -1.9
SOX6-207ENST00000526673 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
SOX6-207ENST00000526673 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
SOX6-207ENST00000526673 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
SOX6-207ENST00000526673 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
SOX6-207ENST00000526673 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
SOX6-207ENST00000526673 SPRR2EP22531 72 aa3.07□□□□□ -1.92
SOX6-207ENST00000526673 SPRR2BP35325 72 aa3.07□□□□□ -1.92
SOX6-207ENST00000526673 SPRR2AP35326 72 aa3.07□□□□□ -1.92
SOX6-207ENST00000526673 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
SOX6-207ENST00000526673 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SOX6-207ENST00000526673 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
SOX6-207ENST00000526673 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
SOX6-207ENST00000526673 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
SOX6-207ENST00000526673 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
SOX6-207ENST00000526673 SPRR2DP22532 72 aa2.96□□□□□ -1.94
SOX6-207ENST00000526673 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
SOX6-207ENST00000526673 MT1AP04731 61 aa2.88□□□□□ -1.95
SOX6-207ENST00000526673 NEBP20929 6669 aa2.86□□□□□ -1.95
SOX6-207ENST00000526673 MT3P25713 68 aa2.84□□□□□ -1.95
SOX6-207ENST00000526673 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
SOX6-207ENST00000526673 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
SOX6-207ENST00000526673 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
SOX6-207ENST00000526673 INE1O15225 51 aa2.73□□□□□ -1.97
SOX6-207ENST00000526673 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
SOX6-207ENST00000526673 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
SOX6-207ENST00000526673 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
SOX6-207ENST00000526673 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
SOX6-207ENST00000526673 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
SOX6-207ENST00000526673 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
SOX6-207ENST00000526673 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
SOX6-207ENST00000526673 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
SOX6-207ENST00000526673 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
SOX6-207ENST00000526673 MT4P47944 62 aa2.51□□□□□ -2.01
SOX6-207ENST00000526673 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SOX6-207ENST00000526673 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
SOX6-207ENST00000526673 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
SOX6-207ENST00000526673 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
SOX6-207ENST00000526673 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
SOX6-207ENST00000526673 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SOX6-207ENST00000526673 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
SOX6-207ENST00000526673 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
SOX6-207ENST00000526673 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
SOX6-207ENST00000526673 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
SOX6-207ENST00000526673 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SOX6-207ENST00000526673 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SOX6-207ENST00000526673 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
SOX6-207ENST00000526673 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
SOX6-207ENST00000526673 PRM1P04553 51 aa2.1□□□□□ -2.07
SOX6-207ENST00000526673 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
SOX6-207ENST00000526673 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SOX6-207ENST00000526673 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SOX6-207ENST00000526673 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
SOX6-207ENST00000526673 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SOX6-207ENST00000526673 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SOX6-207ENST00000526673 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
SOX6-207ENST00000526673 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 54 ms