RNA–Protein interactions for RNA: ENST00000526286.1

NANOG-202, Transcript of Nanog homeobox, humanhuman

TSL 1 (best) BASIC

Gene NANOG, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-202ENST00000526286 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
NANOG-202ENST00000526286 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
NANOG-202ENST00000526286 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
NANOG-202ENST00000526286 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
NANOG-202ENST00000526286 SSPOA2VEC9 5147 aa3.84□□□□□ -1.8
NANOG-202ENST00000526286 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
NANOG-202ENST00000526286 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
NANOG-202ENST00000526286 MT3P25713 68 aa3.77□□□□□ -1.81
NANOG-202ENST00000526286 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
NANOG-202ENST00000526286 MT1EP04732 61 aa3.68□□□□□ -1.82
NANOG-202ENST00000526286 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
NANOG-202ENST00000526286 MT1LQ93083 61 aa3.63□□□□□ -1.83
NANOG-202ENST00000526286 KMT2DO14686 5537 aa3.58□□□□□ -1.84
NANOG-202ENST00000526286 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
NANOG-202ENST00000526286 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
NANOG-202ENST00000526286 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
NANOG-202ENST00000526286 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
NANOG-202ENST00000526286 MT1GP13640 62 aa3.5□□□□□ -1.85
NANOG-202ENST00000526286 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
NANOG-202ENST00000526286 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
NANOG-202ENST00000526286 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
NANOG-202ENST00000526286 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
NANOG-202ENST00000526286 MT1MQ8N339 61 aa3.45□□□□□ -1.86
NANOG-202ENST00000526286 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
NANOG-202ENST00000526286 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
NANOG-202ENST00000526286 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
NANOG-202ENST00000526286 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
NANOG-202ENST00000526286 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
NANOG-202ENST00000526286 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
NANOG-202ENST00000526286 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
NANOG-202ENST00000526286 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
NANOG-202ENST00000526286 SPRR2EP22531 72 aa3.26□□□□□ -1.89
NANOG-202ENST00000526286 SPRR2BP35325 72 aa3.26□□□□□ -1.89
NANOG-202ENST00000526286 SPRR2AP35326 72 aa3.26□□□□□ -1.89
NANOG-202ENST00000526286 INE1O15225 51 aa3.23□□□□□ -1.89
NANOG-202ENST00000526286 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
NANOG-202ENST00000526286 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
NANOG-202ENST00000526286 SPRR2DP22532 72 aa3.15□□□□□ -1.91
NANOG-202ENST00000526286 MT1AP04731 61 aa3.11□□□□□ -1.91
NANOG-202ENST00000526286 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
NANOG-202ENST00000526286 MDN1Q9NU22 5596 aa3.09□□□□□ -1.92
NANOG-202ENST00000526286 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
NANOG-202ENST00000526286 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
NANOG-202ENST00000526286 NEBP20929 6669 aa3□□□□□ -1.93
NANOG-202ENST00000526286 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
NANOG-202ENST00000526286 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
NANOG-202ENST00000526286 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
NANOG-202ENST00000526286 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
NANOG-202ENST00000526286 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
NANOG-202ENST00000526286 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
NANOG-202ENST00000526286 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
NANOG-202ENST00000526286 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
NANOG-202ENST00000526286 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
NANOG-202ENST00000526286 MT4P47944 62 aa2.69□□□□□ -1.98
NANOG-202ENST00000526286 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
NANOG-202ENST00000526286 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
NANOG-202ENST00000526286 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
NANOG-202ENST00000526286 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
NANOG-202ENST00000526286 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
NANOG-202ENST00000526286 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
NANOG-202ENST00000526286 PRM1P04553 51 aa2.45□□□□□ -2.02
NANOG-202ENST00000526286 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
NANOG-202ENST00000526286 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
NANOG-202ENST00000526286 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
NANOG-202ENST00000526286 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
NANOG-202ENST00000526286 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
NANOG-202ENST00000526286 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
NANOG-202ENST00000526286 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
NANOG-202ENST00000526286 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
NANOG-202ENST00000526286 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
NANOG-202ENST00000526286 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
NANOG-202ENST00000526286 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NANOG-202ENST00000526286 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
NANOG-202ENST00000526286 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
NANOG-202ENST00000526286 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
NANOG-202ENST00000526286 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
NANOG-202ENST00000526286 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 50.5 ms