RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
LMX1B-203ENST00000526117 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
LMX1B-203ENST00000526117 MT1GP13640 62 aa6.21□□□□□ -1.42
LMX1B-203ENST00000526117 MT1LQ93083 61 aa6.17□□□□□ -1.42
LMX1B-203ENST00000526117 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
LMX1B-203ENST00000526117 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
LMX1B-203ENST00000526117 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
LMX1B-203ENST00000526117 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
LMX1B-203ENST00000526117 MT1MQ8N339 61 aa6.08□□□□□ -1.44
LMX1B-203ENST00000526117 ROMO1P60602 79 aa6.02□□□□□ -1.45
LMX1B-203ENST00000526117 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
LMX1B-203ENST00000526117 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
LMX1B-203ENST00000526117 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
LMX1B-203ENST00000526117 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
LMX1B-203ENST00000526117 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
LMX1B-203ENST00000526117 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
LMX1B-203ENST00000526117 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
LMX1B-203ENST00000526117 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
LMX1B-203ENST00000526117 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
LMX1B-203ENST00000526117 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
LMX1B-203ENST00000526117 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
LMX1B-203ENST00000526117 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
LMX1B-203ENST00000526117 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
LMX1B-203ENST00000526117 MT4P47944 62 aa5.62□□□□□ -1.51
LMX1B-203ENST00000526117 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
LMX1B-203ENST00000526117 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
LMX1B-203ENST00000526117 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
LMX1B-203ENST00000526117 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
LMX1B-203ENST00000526117 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
LMX1B-203ENST00000526117 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
LMX1B-203ENST00000526117 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
LMX1B-203ENST00000526117 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
LMX1B-203ENST00000526117 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
LMX1B-203ENST00000526117 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
LMX1B-203ENST00000526117 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
LMX1B-203ENST00000526117 MT1AP04731 61 aa5.27□□□□□ -1.57
LMX1B-203ENST00000526117 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
LMX1B-203ENST00000526117 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
LMX1B-203ENST00000526117 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
LMX1B-203ENST00000526117 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
LMX1B-203ENST00000526117 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
LMX1B-203ENST00000526117 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
LMX1B-203ENST00000526117 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
LMX1B-203ENST00000526117 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
LMX1B-203ENST00000526117 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
LMX1B-203ENST00000526117 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
LMX1B-203ENST00000526117 MT3P25713 68 aa4.81□□□□□ -1.64
LMX1B-203ENST00000526117 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
LMX1B-203ENST00000526117 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
LMX1B-203ENST00000526117 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
LMX1B-203ENST00000526117 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
LMX1B-203ENST00000526117 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
LMX1B-203ENST00000526117 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
LMX1B-203ENST00000526117 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
LMX1B-203ENST00000526117 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
LMX1B-203ENST00000526117 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
LMX1B-203ENST00000526117 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
LMX1B-203ENST00000526117 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
LMX1B-203ENST00000526117 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
LMX1B-203ENST00000526117 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
LMX1B-203ENST00000526117 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
LMX1B-203ENST00000526117 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
LMX1B-203ENST00000526117 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
LMX1B-203ENST00000526117 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
LMX1B-203ENST00000526117 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
LMX1B-203ENST00000526117 H3BS24 57 aa3.76□□□□□ -1.81
LMX1B-203ENST00000526117 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
LMX1B-203ENST00000526117 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
LMX1B-203ENST00000526117 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
LMX1B-203ENST00000526117 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
LMX1B-203ENST00000526117 INE1O15225 51 aa3.24□□□□□ -1.89
LMX1B-203ENST00000526117 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
LMX1B-203ENST00000526117 PRM1P04553 51 aa3.06□□□□□ -1.92
LMX1B-203ENST00000526117 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
LMX1B-203ENST00000526117 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
LMX1B-203ENST00000526117 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
LMX1B-203ENST00000526117 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 54.6 ms