RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 SPRR2DP22532 72 aa4.59□□□□□ -1.67
CTTN-210ENST00000525852 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
CTTN-210ENST00000525852 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
CTTN-210ENST00000525852 MT1EP04732 61 aa4.57□□□□□ -1.68
CTTN-210ENST00000525852 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
CTTN-210ENST00000525852 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
CTTN-210ENST00000525852 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
CTTN-210ENST00000525852 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
CTTN-210ENST00000525852 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
CTTN-210ENST00000525852 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
CTTN-210ENST00000525852 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
CTTN-210ENST00000525852 MT1LQ93083 61 aa4.41□□□□□ -1.7
CTTN-210ENST00000525852 MT1GP13640 62 aa4.39□□□□□ -1.71
CTTN-210ENST00000525852 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
CTTN-210ENST00000525852 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
CTTN-210ENST00000525852 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
CTTN-210ENST00000525852 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
CTTN-210ENST00000525852 MT1MQ8N339 61 aa4.34□□□□□ -1.71
CTTN-210ENST00000525852 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CTTN-210ENST00000525852 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
CTTN-210ENST00000525852 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
CTTN-210ENST00000525852 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
CTTN-210ENST00000525852 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
CTTN-210ENST00000525852 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
CTTN-210ENST00000525852 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
CTTN-210ENST00000525852 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
CTTN-210ENST00000525852 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
CTTN-210ENST00000525852 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CTTN-210ENST00000525852 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
CTTN-210ENST00000525852 MT4P47944 62 aa4.03□□□□□ -1.76
CTTN-210ENST00000525852 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
CTTN-210ENST00000525852 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
CTTN-210ENST00000525852 H3BS24 57 aa3.97□□□□□ -1.77
CTTN-210ENST00000525852 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
CTTN-210ENST00000525852 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
CTTN-210ENST00000525852 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
CTTN-210ENST00000525852 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
CTTN-210ENST00000525852 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
CTTN-210ENST00000525852 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.8
CTTN-210ENST00000525852 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
CTTN-210ENST00000525852 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
CTTN-210ENST00000525852 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
CTTN-210ENST00000525852 MT1AP04731 61 aa3.73□□□□□ -1.81
CTTN-210ENST00000525852 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
CTTN-210ENST00000525852 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
CTTN-210ENST00000525852 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
CTTN-210ENST00000525852 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
CTTN-210ENST00000525852 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CTTN-210ENST00000525852 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
CTTN-210ENST00000525852 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
CTTN-210ENST00000525852 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
CTTN-210ENST00000525852 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
CTTN-210ENST00000525852 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
CTTN-210ENST00000525852 MT3P25713 68 aa3.4□□□□□ -1.87
CTTN-210ENST00000525852 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CTTN-210ENST00000525852 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
CTTN-210ENST00000525852 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
CTTN-210ENST00000525852 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
CTTN-210ENST00000525852 INE1O15225 51 aa3.24□□□□□ -1.89
CTTN-210ENST00000525852 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
CTTN-210ENST00000525852 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
CTTN-210ENST00000525852 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
CTTN-210ENST00000525852 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
CTTN-210ENST00000525852 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
CTTN-210ENST00000525852 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
CTTN-210ENST00000525852 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.94
CTTN-210ENST00000525852 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CTTN-210ENST00000525852 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
CTTN-210ENST00000525852 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
CTTN-210ENST00000525852 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
CTTN-210ENST00000525852 PRM1P04553 51 aa2.45□□□□□ -2.02
CTTN-210ENST00000525852 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CTTN-210ENST00000525852 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
CTTN-210ENST00000525852 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
CTTN-210ENST00000525852 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CTTN-210ENST00000525852 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CTTN-210ENST00000525852 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CTTN-210ENST00000525852 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 59.9 ms