RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
CSTF3-206ENST00000524827 J3QR89 54 aa4.65□□□□□ -1.67
CSTF3-206ENST00000524827 SERP1Q9Y6X1 66 aa4.62□□□□□ -1.67
CSTF3-206ENST00000524827 SEC61GP60059 68 aa4.61□□□□□ -1.67
CSTF3-206ENST00000524827 A0A1B0GU33 70 aa4.59□□□□□ -1.67
CSTF3-206ENST00000524827 A0A1B0GV90 55 aa4.58□□□□□ -1.68
CSTF3-206ENST00000524827 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
CSTF3-206ENST00000524827 COA5Q86WW8 74 aa4.57□□□□□ -1.68
CSTF3-206ENST00000524827 TNP1P09430 55 aa4.55□□□□□ -1.68
CSTF3-206ENST00000524827 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
CSTF3-206ENST00000524827 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
CSTF3-206ENST00000524827 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
CSTF3-206ENST00000524827 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
CSTF3-206ENST00000524827 A8MU10 97 aa4.45□□□□□ -1.7
CSTF3-206ENST00000524827 SERP2Q8N6R1 65 aa4.4□□□□□ -1.71
CSTF3-206ENST00000524827 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
CSTF3-206ENST00000524827 A0A1B0GU69 56 aa4.33□□□□□ -1.72
CSTF3-206ENST00000524827 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CSTF3-206ENST00000524827 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
CSTF3-206ENST00000524827 K7ERU9 68 aa4.29□□□□□ -1.72
CSTF3-206ENST00000524827 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CSTF3-206ENST00000524827 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
CSTF3-206ENST00000524827 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
CSTF3-206ENST00000524827 H7BZZ5 65 aa4.19□□□□□ -1.74
CSTF3-206ENST00000524827 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
CSTF3-206ENST00000524827 MT1AP04731 61 aa4.15□□□□□ -1.75
CSTF3-206ENST00000524827 COX7CP15954 63 aa4.14□□□□□ -1.75
CSTF3-206ENST00000524827 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CSTF3-206ENST00000524827 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
CSTF3-206ENST00000524827 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
CSTF3-206ENST00000524827 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
CSTF3-206ENST00000524827 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
CSTF3-206ENST00000524827 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
CSTF3-206ENST00000524827 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
CSTF3-206ENST00000524827 UQCR11O14957 56 aa3.93□□□□□ -1.78
CSTF3-206ENST00000524827 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
CSTF3-206ENST00000524827 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
CSTF3-206ENST00000524827 K7ERS5 55 aa3.81□□□□□ -1.8
CSTF3-206ENST00000524827 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
CSTF3-206ENST00000524827 MT3P25713 68 aa3.8□□□□□ -1.8
CSTF3-206ENST00000524827 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
CSTF3-206ENST00000524827 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
CSTF3-206ENST00000524827 CCDC179H3BU77 68 aa3.73□□□□□ -1.81
CSTF3-206ENST00000524827 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
CSTF3-206ENST00000524827 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
CSTF3-206ENST00000524827 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
CSTF3-206ENST00000524827 TMEM258P61165 79 aa3.55□□□□□ -1.84
CSTF3-206ENST00000524827 PSPHP1O15172 72 aa3.53□□□□□ -1.84
CSTF3-206ENST00000524827 PCP4P48539 62 aa3.53□□□□□ -1.84
CSTF3-206ENST00000524827 Q1T7F1 81 aa3.53□□□□□ -1.84
CSTF3-206ENST00000524827 ROMO1P60602 79 aa3.48□□□□□ -1.85
CSTF3-206ENST00000524827 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
CSTF3-206ENST00000524827 V9GYY9 64 aa3.43□□□□□ -1.86
CSTF3-206ENST00000524827 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CSTF3-206ENST00000524827 A6NED7 52 aa3.38□□□□□ -1.87
CSTF3-206ENST00000524827 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
CSTF3-206ENST00000524827 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CSTF3-206ENST00000524827 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
CSTF3-206ENST00000524827 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
CSTF3-206ENST00000524827 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CSTF3-206ENST00000524827 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CSTF3-206ENST00000524827 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
CSTF3-206ENST00000524827 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
CSTF3-206ENST00000524827 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CSTF3-206ENST00000524827 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
CSTF3-206ENST00000524827 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
CSTF3-206ENST00000524827 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
CSTF3-206ENST00000524827 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
CSTF3-206ENST00000524827 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
CSTF3-206ENST00000524827 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
CSTF3-206ENST00000524827 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
CSTF3-206ENST00000524827 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
CSTF3-206ENST00000524827 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CSTF3-206ENST00000524827 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
CSTF3-206ENST00000524827 INE1O15225 51 aa1.87□□□□□ -2.11
CSTF3-206ENST00000524827 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
CSTF3-206ENST00000524827 PRM1P04553 51 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms