RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
CSTF3-205ENST00000524775 NEBP20929 6669 aa4.21□□□□□ -1.74
CSTF3-205ENST00000524775 MT1LQ93083 61 aa4.19□□□□□ -1.74
CSTF3-205ENST00000524775 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
CSTF3-205ENST00000524775 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CSTF3-205ENST00000524775 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
CSTF3-205ENST00000524775 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
CSTF3-205ENST00000524775 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
CSTF3-205ENST00000524775 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
CSTF3-205ENST00000524775 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
CSTF3-205ENST00000524775 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
CSTF3-205ENST00000524775 MT1GP13640 62 aa4.05□□□□□ -1.76
CSTF3-205ENST00000524775 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
CSTF3-205ENST00000524775 MT1MQ8N339 61 aa4.03□□□□□ -1.76
CSTF3-205ENST00000524775 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
CSTF3-205ENST00000524775 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
CSTF3-205ENST00000524775 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
CSTF3-205ENST00000524775 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
CSTF3-205ENST00000524775 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CSTF3-205ENST00000524775 SPRR2EP22531 72 aa3.92□□□□□ -1.78
CSTF3-205ENST00000524775 SPRR2BP35325 72 aa3.92□□□□□ -1.78
CSTF3-205ENST00000524775 SPRR2AP35326 72 aa3.92□□□□□ -1.78
CSTF3-205ENST00000524775 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
CSTF3-205ENST00000524775 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
CSTF3-205ENST00000524775 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CSTF3-205ENST00000524775 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
CSTF3-205ENST00000524775 H3BS24 57 aa3.81□□□□□ -1.8
CSTF3-205ENST00000524775 SPRR2DP22532 72 aa3.8□□□□□ -1.8
CSTF3-205ENST00000524775 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
CSTF3-205ENST00000524775 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
CSTF3-205ENST00000524775 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
CSTF3-205ENST00000524775 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
CSTF3-205ENST00000524775 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
CSTF3-205ENST00000524775 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
CSTF3-205ENST00000524775 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
CSTF3-205ENST00000524775 MT1AP04731 61 aa3.56□□□□□ -1.84
CSTF3-205ENST00000524775 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
CSTF3-205ENST00000524775 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
CSTF3-205ENST00000524775 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
CSTF3-205ENST00000524775 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
CSTF3-205ENST00000524775 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
CSTF3-205ENST00000524775 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
CSTF3-205ENST00000524775 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
CSTF3-205ENST00000524775 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
CSTF3-205ENST00000524775 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CSTF3-205ENST00000524775 MT4P47944 62 aa3.33□□□□□ -1.88
CSTF3-205ENST00000524775 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
CSTF3-205ENST00000524775 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
CSTF3-205ENST00000524775 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
CSTF3-205ENST00000524775 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
CSTF3-205ENST00000524775 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
CSTF3-205ENST00000524775 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
CSTF3-205ENST00000524775 MT3P25713 68 aa3.19□□□□□ -1.9
CSTF3-205ENST00000524775 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
CSTF3-205ENST00000524775 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
CSTF3-205ENST00000524775 INE1O15225 51 aa3.16□□□□□ -1.9
CSTF3-205ENST00000524775 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
CSTF3-205ENST00000524775 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
CSTF3-205ENST00000524775 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
CSTF3-205ENST00000524775 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
CSTF3-205ENST00000524775 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
CSTF3-205ENST00000524775 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
CSTF3-205ENST00000524775 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
CSTF3-205ENST00000524775 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
CSTF3-205ENST00000524775 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CSTF3-205ENST00000524775 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CSTF3-205ENST00000524775 PRM1P04553 51 aa2.61□□□□□ -1.99
CSTF3-205ENST00000524775 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CSTF3-205ENST00000524775 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
CSTF3-205ENST00000524775 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
CSTF3-205ENST00000524775 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
CSTF3-205ENST00000524775 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
CSTF3-205ENST00000524775 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
CSTF3-205ENST00000524775 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CSTF3-205ENST00000524775 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
CSTF3-205ENST00000524775 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CSTF3-205ENST00000524775 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CSTF3-205ENST00000524775 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 80.8 ms