RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
EFCAB13-213ENST00000523978 SPART-AS1P0CW21 52 aa1.84□□□□□ -2.11
EFCAB13-213ENST00000523978 M0R2T5 61 aa1.82□□□□□ -2.12
EFCAB13-213ENST00000523978 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
EFCAB13-213ENST00000523978 NEBP20929 6669 aa1.81□□□□□ -2.12
EFCAB13-213ENST00000523978 C9orf92A6NGG3 77 aa1.81□□□□□ -2.12
EFCAB13-213ENST00000523978 SMR3BP02814 79 aaPredicted RBP1.81□□□□□ -2.12
EFCAB13-213ENST00000523978 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
EFCAB13-213ENST00000523978 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
EFCAB13-213ENST00000523978 DNAH2Q9P225 4427 aa1.8□□□□□ -2.12
EFCAB13-213ENST00000523978 KRTAP2-3P0C7H8 128 aa1.79□□□□□ -2.12
EFCAB13-213ENST00000523978 KRTAP2-4Q9BYR9 128 aa1.79□□□□□ -2.12
EFCAB13-213ENST00000523978 KRTAP2-1Q9BYU5 128 aa1.79□□□□□ -2.12
EFCAB13-213ENST00000523978 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
EFCAB13-213ENST00000523978 DNAH5Q8TE73 4624 aa1.78□□□□□ -2.12
EFCAB13-213ENST00000523978 LRP1BQ9NZR2 4599 aa1.78□□□□□ -2.12
EFCAB13-213ENST00000523978 DNAH17Q9UFH2 4485 aa1.78□□□□□ -2.12
EFCAB13-213ENST00000523978 H3BNG1 76 aa1.77□□□□□ -2.13
EFCAB13-213ENST00000523978 DNAH6Q9C0G6 4158 aa1.77□□□□□ -2.13
EFCAB13-213ENST00000523978 PKD1P98161 4303 aa1.76□□□□□ -2.13
EFCAB13-213ENST00000523978 KRTAP20-1Q3LI63 56 aa1.76□□□□□ -2.13
EFCAB13-213ENST00000523978 LINC01556Q5JQF7 62 aa1.76□□□□□ -2.13
EFCAB13-213ENST00000523978 A0A096LPF7 62 aa1.75□□□□□ -2.13
EFCAB13-213ENST00000523978 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
EFCAB13-213ENST00000523978 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
EFCAB13-213ENST00000523978 LRP1Q07954 4544 aaKnown RBP1.71□□□□□ -2.14
EFCAB13-213ENST00000523978 FAT3Q8TDW7 4589 aa1.7□□□□□ -2.14
EFCAB13-213ENST00000523978 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
EFCAB13-213ENST00000523978 TNXBP22105 4242 aa1.67□□□□□ -2.14
EFCAB13-213ENST00000523978 RPS29P62273 56 aaKnown RBP1.66□□□□□ -2.14
EFCAB13-213ENST00000523978 KRTAP8-1Q8IUC2 63 aa1.64□□□□□ -2.15
EFCAB13-213ENST00000523978 USH2AO75445 5202 aa1.64□□□□□ -2.15
EFCAB13-213ENST00000523978 LPAP08519 4548 aa1.64□□□□□ -2.15
EFCAB13-213ENST00000523978 FLGP20930 4061 aaPredicted RBP1.64□□□□□ -2.15
EFCAB13-213ENST00000523978 KMT2DO14686 5537 aa1.62□□□□□ -2.15
EFCAB13-213ENST00000523978 MT1HL1P0DM35 61 aa1.6□□□□□ -2.15
EFCAB13-213ENST00000523978 DEFB4AO15263 64 aa1.58□□□□□ -2.16
EFCAB13-213ENST00000523978 PRM1P04553 51 aa1.55□□□□□ -2.16
EFCAB13-213ENST00000523978 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
EFCAB13-213ENST00000523978 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
EFCAB13-213ENST00000523978 HTN3P15516 51 aa1.49□□□□□ -2.17
EFCAB13-213ENST00000523978 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
EFCAB13-213ENST00000523978 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
EFCAB13-213ENST00000523978 MT1HP80294 61 aa1.42□□□□□ -2.18
EFCAB13-213ENST00000523978 MUC17Q685J3 4493 aa1.42□□□□□ -2.18
EFCAB13-213ENST00000523978 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.18
EFCAB13-213ENST00000523978 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
EFCAB13-213ENST00000523978 SPRR2EP22531 72 aa1.36□□□□□ -2.19
EFCAB13-213ENST00000523978 SPRR2BP35325 72 aa1.36□□□□□ -2.19
EFCAB13-213ENST00000523978 SPRR2AP35326 72 aa1.36□□□□□ -2.19
EFCAB13-213ENST00000523978 KRTAP19-5Q3LI72 72 aa1.36□□□□□ -2.19
EFCAB13-213ENST00000523978 MT1AP04731 61 aa1.35□□□□□ -2.19
EFCAB13-213ENST00000523978 KRTAP19-6Q3LI70 58 aa1.33□□□□□ -2.2
EFCAB13-213ENST00000523978 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
EFCAB13-213ENST00000523978 SPRR2DP22532 72 aa1.32□□□□□ -2.2
EFCAB13-213ENST00000523978 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
EFCAB13-213ENST00000523978 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
EFCAB13-213ENST00000523978 SPRR2FQ96RM1 72 aa1.25□□□□□ -2.21
EFCAB13-213ENST00000523978 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
EFCAB13-213ENST00000523978 MT4P47944 62 aa1.23□□□□□ -2.21
EFCAB13-213ENST00000523978 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
EFCAB13-213ENST00000523978 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
EFCAB13-213ENST00000523978 MT2AP02795 61 aa1.21□□□□□ -2.22
EFCAB13-213ENST00000523978 MT1FP04733 61 aa1.2□□□□□ -2.22
EFCAB13-213ENST00000523978 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
EFCAB13-213ENST00000523978 MT1EP04732 61 aa1.1□□□□□ -2.23
EFCAB13-213ENST00000523978 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
EFCAB13-213ENST00000523978 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
EFCAB13-213ENST00000523978 MT1LQ93083 61 aa1.03□□□□□ -2.24
EFCAB13-213ENST00000523978 MT1BP07438 61 aa0.95□□□□□ -2.26
EFCAB13-213ENST00000523978 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
EFCAB13-213ENST00000523978 MT1XP80297 61 aa0.91□□□□□ -2.26
EFCAB13-213ENST00000523978 KRTAP19-8Q3LI54 63 aa0.89□□□□□ -2.27
EFCAB13-213ENST00000523978 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
EFCAB13-213ENST00000523978 KRTAP19-7Q3SYF9 63 aa0.79□□□□□ -2.28
EFCAB13-213ENST00000523978 MT1GP13640 62 aa0.75□□□□□ -2.29
EFCAB13-213ENST00000523978 MT1MQ8N339 61 aa0.73□□□□□ -2.29
EFCAB13-213ENST00000523978 KRTAP6-1Q3LI64 71 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms