RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 A0A0D9SG42 100 aa3.3□□□□□ -1.88
PTPN12-216ENST00000523952 ATP5EP2Q5VTU8 51 aa3.29□□□□□ -1.88
PTPN12-216ENST00000523952 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
PTPN12-216ENST00000523952 SMIM6P0DI80 62 aa3.27□□□□□ -1.89
PTPN12-216ENST00000523952 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
PTPN12-216ENST00000523952 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
PTPN12-216ENST00000523952 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
PTPN12-216ENST00000523952 ETDBQ3ZM63 59 aa3.24□□□□□ -1.89
PTPN12-216ENST00000523952 MT1LQ93083 61 aa3.24□□□□□ -1.89
PTPN12-216ENST00000523952 K7ERS5 55 aa3.23□□□□□ -1.89
PTPN12-216ENST00000523952 ACYP2P14621 99 aa3.23□□□□□ -1.89
PTPN12-216ENST00000523952 A6NED7 52 aa3.22□□□□□ -1.89
PTPN12-216ENST00000523952 H3BPC8 53 aa3.22□□□□□ -1.89
PTPN12-216ENST00000523952 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
PTPN12-216ENST00000523952 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PTPN12-216ENST00000523952 F8W1H4 67 aa3.21□□□□□ -1.9
PTPN12-216ENST00000523952 CHKB-CPT1BH3BT56 60 aa3.21□□□□□ -1.9
PTPN12-216ENST00000523952 GTF2H5Q6ZYL4 71 aa3.21□□□□□ -1.9
PTPN12-216ENST00000523952 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
PTPN12-216ENST00000523952 COL5A1-AS1Q5SY13 56 aa3.18□□□□□ -1.9
PTPN12-216ENST00000523952 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
PTPN12-216ENST00000523952 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
PTPN12-216ENST00000523952 K7ERU9 68 aa3.15□□□□□ -1.91
PTPN12-216ENST00000523952 MT3P25713 68 aa3.14□□□□□ -1.91
PTPN12-216ENST00000523952 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
PTPN12-216ENST00000523952 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
PTPN12-216ENST00000523952 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
PTPN12-216ENST00000523952 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
PTPN12-216ENST00000523952 J3QR89 54 aa3.11□□□□□ -1.91
PTPN12-216ENST00000523952 LINC00643Q86TS7 51 aa3.11□□□□□ -1.91
PTPN12-216ENST00000523952 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
PTPN12-216ENST00000523952 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
PTPN12-216ENST00000523952 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
PTPN12-216ENST00000523952 TNP1P09430 55 aa3.02□□□□□ -1.93
PTPN12-216ENST00000523952 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
PTPN12-216ENST00000523952 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
PTPN12-216ENST00000523952 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
PTPN12-216ENST00000523952 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
PTPN12-216ENST00000523952 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
PTPN12-216ENST00000523952 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
PTPN12-216ENST00000523952 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
PTPN12-216ENST00000523952 A0A1B0GU33 70 aa2.94□□□□□ -1.94
PTPN12-216ENST00000523952 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
PTPN12-216ENST00000523952 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
PTPN12-216ENST00000523952 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
PTPN12-216ENST00000523952 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
PTPN12-216ENST00000523952 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
PTPN12-216ENST00000523952 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
PTPN12-216ENST00000523952 TMEM258P61165 79 aa2.86□□□□□ -1.95
PTPN12-216ENST00000523952 COA5Q86WW8 74 aa2.84□□□□□ -1.95
PTPN12-216ENST00000523952 ROMO1P60602 79 aa2.82□□□□□ -1.96
PTPN12-216ENST00000523952 A8MU10 97 aa2.81□□□□□ -1.96
PTPN12-216ENST00000523952 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
PTPN12-216ENST00000523952 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
PTPN12-216ENST00000523952 MT1AP04731 61 aa2.76□□□□□ -1.97
PTPN12-216ENST00000523952 A0A1B0GU69 56 aa2.75□□□□□ -1.97
PTPN12-216ENST00000523952 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
PTPN12-216ENST00000523952 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
PTPN12-216ENST00000523952 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
PTPN12-216ENST00000523952 COX7CP15954 63 aa2.62□□□□□ -1.99
PTPN12-216ENST00000523952 Q1T7F1 81 aa2.6□□□□□ -1.99
PTPN12-216ENST00000523952 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
PTPN12-216ENST00000523952 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
PTPN12-216ENST00000523952 H7BZZ5 65 aa2.55□□□□□ -2
PTPN12-216ENST00000523952 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
PTPN12-216ENST00000523952 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
PTPN12-216ENST00000523952 UQCR11O14957 56 aa2.45□□□□□ -2.02
PTPN12-216ENST00000523952 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
PTPN12-216ENST00000523952 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
PTPN12-216ENST00000523952 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
PTPN12-216ENST00000523952 INE1O15225 51 aa2.34□□□□□ -2.03
PTPN12-216ENST00000523952 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
PTPN12-216ENST00000523952 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
PTPN12-216ENST00000523952 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
PTPN12-216ENST00000523952 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
PTPN12-216ENST00000523952 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
PTPN12-216ENST00000523952 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
PTPN12-216ENST00000523952 PRM1P04553 51 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 107.5 ms