RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
CCNC-215ENST00000523799 LCA10Q71F78 164 aa3.71□□□□□ -1.82
CCNC-215ENST00000523799 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
CCNC-215ENST00000523799 UQCR11O14957 56 aa3.69□□□□□ -1.82
CCNC-215ENST00000523799 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
CCNC-215ENST00000523799 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
CCNC-215ENST00000523799 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
CCNC-215ENST00000523799 A8MU10 97 aa3.65□□□□□ -1.83
CCNC-215ENST00000523799 SPATA8Q6RVD6 105 aa3.65□□□□□ -1.83
CCNC-215ENST00000523799 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
CCNC-215ENST00000523799 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
CCNC-215ENST00000523799 A0A1B0GU33 70 aa3.58□□□□□ -1.84
CCNC-215ENST00000523799 S4R3F8 94 aa3.56□□□□□ -1.84
CCNC-215ENST00000523799 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
CCNC-215ENST00000523799 K7ERS5 55 aa3.54□□□□□ -1.84
CCNC-215ENST00000523799 H0YAA0 97 aa3.5□□□□□ -1.85
CCNC-215ENST00000523799 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
CCNC-215ENST00000523799 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
CCNC-215ENST00000523799 CRIPTQ9P021 101 aa3.5□□□□□ -1.85
CCNC-215ENST00000523799 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
CCNC-215ENST00000523799 MT1XP80297 61 aa3.45□□□□□ -1.86
CCNC-215ENST00000523799 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
CCNC-215ENST00000523799 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
CCNC-215ENST00000523799 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
CCNC-215ENST00000523799 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
CCNC-215ENST00000523799 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
CCNC-215ENST00000523799 A0A0D9SG42 100 aa3.38□□□□□ -1.87
CCNC-215ENST00000523799 M0QZ58 72 aa3.38□□□□□ -1.87
CCNC-215ENST00000523799 P0C880 135 aa3.37□□□□□ -1.87
CCNC-215ENST00000523799 ROMO1P60602 79 aa3.36□□□□□ -1.87
CCNC-215ENST00000523799 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
CCNC-215ENST00000523799 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
CCNC-215ENST00000523799 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
CCNC-215ENST00000523799 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
CCNC-215ENST00000523799 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
CCNC-215ENST00000523799 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
CCNC-215ENST00000523799 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
CCNC-215ENST00000523799 R4GN34 69 aa3.3□□□□□ -1.88
CCNC-215ENST00000523799 MT4P47944 62 aa3.29□□□□□ -1.88
CCNC-215ENST00000523799 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
CCNC-215ENST00000523799 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
CCNC-215ENST00000523799 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
CCNC-215ENST00000523799 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
CCNC-215ENST00000523799 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
CCNC-215ENST00000523799 CAMK2N1Q7Z7J9 78 aa3.14□□□□□ -1.91
CCNC-215ENST00000523799 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
CCNC-215ENST00000523799 MT1EP04732 61 aa3.09□□□□□ -1.91
CCNC-215ENST00000523799 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
CCNC-215ENST00000523799 MT1GP13640 62 aa3.07□□□□□ -1.92
CCNC-215ENST00000523799 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
CCNC-215ENST00000523799 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.93
CCNC-215ENST00000523799 TNP1P09430 55 aa3.01□□□□□ -1.93
CCNC-215ENST00000523799 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
CCNC-215ENST00000523799 MT1MQ8N339 61 aa2.98□□□□□ -1.93
CCNC-215ENST00000523799 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CCNC-215ENST00000523799 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CCNC-215ENST00000523799 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
CCNC-215ENST00000523799 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
CCNC-215ENST00000523799 MT1LQ93083 61 aa2.88□□□□□ -1.95
CCNC-215ENST00000523799 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
CCNC-215ENST00000523799 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
CCNC-215ENST00000523799 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CCNC-215ENST00000523799 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CCNC-215ENST00000523799 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CCNC-215ENST00000523799 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
CCNC-215ENST00000523799 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
CCNC-215ENST00000523799 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
CCNC-215ENST00000523799 MT1AP04731 61 aa2.44□□□□□ -2.02
CCNC-215ENST00000523799 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CCNC-215ENST00000523799 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
CCNC-215ENST00000523799 INE1O15225 51 aa2.41□□□□□ -2.02
CCNC-215ENST00000523799 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
CCNC-215ENST00000523799 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
CCNC-215ENST00000523799 PHGR1C9JFL3 82 aa2□□□□□ -2.09
CCNC-215ENST00000523799 PRM1P04553 51 aa1.74□□□□□ -2.13
CCNC-215ENST00000523799 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
CCNC-215ENST00000523799 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 70.1 ms