RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-222	ENST00000523530	KRTAP4-12	Q9BQ66	201 aa		5.89	□□□□□ -1.47
DENND3-222	ENST00000523530	KRTAP15-1	Q3LI76	137 aa		5.88	□□□□□ -1.47
DENND3-222	ENST00000523530	MT1E	P04732	61 aa		5.85	□□□□□ -1.47
DENND3-222	ENST00000523530	SPRR2F	Q96RM1	72 aa		5.84	□□□□□ -1.47
DENND3-222	ENST00000523530	SYNE2	Q8WXH0	6885 aa	Known RBP	5.84	□□□□□ -1.48
DENND3-222	ENST00000523530	KRTAP5-9	P26371	169 aa		5.76	□□□□□ -1.49
DENND3-222	ENST00000523530	KRTAP6-3	Q3LI67	103 aa		5.73	□□□□□ -1.49
DENND3-222	ENST00000523530	MT1L	Q93083	61 aa		5.73	□□□□□ -1.49
DENND3-222	ENST00000523530	LCE1D	Q5T752	114 aa		5.69	□□□□□ -1.5
DENND3-222	ENST00000523530	KRTAP4-2	Q9BYR5	136 aa		5.69	□□□□□ -1.5
DENND3-222	ENST00000523530	KRTAP19-3	Q7Z4W3	81 aa		5.66	□□□□□ -1.5
DENND3-222	ENST00000523530	KRTAP19-4	Q3LI73	84 aa		5.64	□□□□□ -1.51
DENND3-222	ENST00000523530	MUC12	Q9UKN1	5478 aa		5.63	□□□□□ -1.51
DENND3-222	ENST00000523530	KRTAP4-9	Q9BYQ8	210 aa		5.63	□□□□□ -1.51
DENND3-222	ENST00000523530	LCE3C	Q5T5A8	94 aa		5.61	□□□□□ -1.51
DENND3-222	ENST00000523530	MT1G	P13640	62 aa		5.6	□□□□□ -1.51
DENND3-222	ENST00000523530	KRTAP5-3	Q6L8H2	238 aa		5.6	□□□□□ -1.51
DENND3-222	ENST00000523530	SPRR2E	P22531	72 aa		5.58	□□□□□ -1.52
DENND3-222	ENST00000523530	SPRR2B	P35325	72 aa		5.58	□□□□□ -1.52
DENND3-222	ENST00000523530	SPRR2A	P35326	72 aa		5.58	□□□□□ -1.52
DENND3-222	ENST00000523530	LCE1A	Q5T7P2	110 aa		5.56	□□□□□ -1.52
DENND3-222	ENST00000523530	LCE5A	Q5TCM9	118 aa		5.55	□□□□□ -1.52
DENND3-222	ENST00000523530	MT1M	Q8N339	61 aa		5.53	□□□□□ -1.52
DENND3-222	ENST00000523530	SPRR5	A0A1B0GTR4	108 aa		5.49	□□□□□ -1.53
DENND3-222	ENST00000523530	MDN1	Q9NU22	5596 aa		5.47	□□□□□ -1.53
DENND3-222	ENST00000523530	NEB	P20929	6669 aa		5.44	□□□□□ -1.54
DENND3-222	ENST00000523530	KRTAP4-3	Q9BYR4	195 aa		5.41	□□□□□ -1.54
DENND3-222	ENST00000523530	SPRR2D	P22532	72 aa		5.38	□□□□□ -1.55
DENND3-222	ENST00000523530	LUZP6	Q538Z0	58 aa		5.33	□□□□□ -1.56
DENND3-222	ENST00000523530	KRTAP4-11	Q9BYQ6	195 aa		5.31	□□□□□ -1.56
DENND3-222	ENST00000523530	KRTAP9-6	A8MVA2	160 aa		5.27	□□□□□ -1.57
DENND3-222	ENST00000523530		A0A0A0MQY5	61 aa		5.25	□□□□□ -1.57
DENND3-222	ENST00000523530	KRTAP20-1	Q3LI63	56 aa		5.25	□□□□□ -1.57
DENND3-222	ENST00000523530	DST	Q03001	7570 aa	Known RBP	5.21	□□□□□ -1.58
DENND3-222	ENST00000523530	KRTAP2-3	P0C7H8	128 aa		5.12	□□□□□ -1.59
DENND3-222	ENST00000523530	KRTAP2-4	Q9BYR9	128 aa		5.12	□□□□□ -1.59
DENND3-222	ENST00000523530	NDUFAF8	A1L188	74 aa		5.1	□□□□□ -1.59
DENND3-222	ENST00000523530	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.96	□□□□□ -1.62
DENND3-222	ENST00000523530	KRTAP2-2	Q9BYT5	123 aa		4.95	□□□□□ -1.62
DENND3-222	ENST00000523530	KRTAP2-1	Q9BYU5	128 aa		4.95	□□□□□ -1.62
DENND3-222	ENST00000523530	MT1A	P04731	61 aa		4.87	□□□□□ -1.63
DENND3-222	ENST00000523530	KRTAP6-1	Q3LI64	71 aa		4.82	□□□□□ -1.64
DENND3-222	ENST00000523530	KRTAP5-4	Q6L8H1	288 aa		4.79	□□□□□ -1.64
DENND3-222	ENST00000523530	LCE4A	Q5TA78	99 aa		4.76	□□□□□ -1.65
DENND3-222	ENST00000523530	GPR98	Q8WXG9	6306 aa		4.75	□□□□□ -1.65
DENND3-222	ENST00000523530	KRTAP12-4	P60329	112 aa		4.69	□□□□□ -1.66
DENND3-222	ENST00000523530	MT4	P47944	62 aa		4.66	□□□□□ -1.66
DENND3-222	ENST00000523530	SYNE1	Q8NF91	8797 aa	Known RBP	4.62	□□□□□ -1.67
DENND3-222	ENST00000523530	KRTAP20-2	Q3LI61	65 aa		4.5	□□□□□ -1.69
DENND3-222	ENST00000523530	KRTAP6-2	Q3LI66	62 aa		4.47	□□□□□ -1.69
DENND3-222	ENST00000523530	HMCN1	Q96RW7	5635 aa		4.43	□□□□□ -1.7
DENND3-222	ENST00000523530	MT3	P25713	68 aa		4.43	□□□□□ -1.7
DENND3-222	ENST00000523530	KRTAP5-2	Q701N4	177 aa		4.33	□□□□□ -1.72
DENND3-222	ENST00000523530	INE1	O15225	51 aa		4.22	□□□□□ -1.73
DENND3-222	ENST00000523530	LCE3D	Q9BYE3	92 aa		4.21	□□□□□ -1.74
DENND3-222	ENST00000523530	AHNAK2	Q8IVF2	5795 aa		4.19	□□□□□ -1.74
DENND3-222	ENST00000523530	KRTAP5-10	Q6L8G5	202 aa		4.11	□□□□□ -1.75
DENND3-222	ENST00000523530	LCE3E	Q5T5B0	92 aa		4.08	□□□□□ -1.76
DENND3-222	ENST00000523530	KRTAP5-7	Q6L8G8	165 aa		4.03	□□□□□ -1.76
DENND3-222	ENST00000523530	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.01	□□□□□ -1.77
DENND3-222	ENST00000523530	OBSCN	Q5VST9	7968 aa		4	□□□□□ -1.77
DENND3-222	ENST00000523530	LCE1E	Q5T753	118 aa		3.85	□□□□□ -1.79
DENND3-222	ENST00000523530	KRTAP5-8	O75690	187 aa		3.76	□□□□□ -1.81
DENND3-222	ENST00000523530	KRTAP5-1	Q6L8H4	278 aa		3.76	□□□□□ -1.81
DENND3-222	ENST00000523530	LCE1B	Q5T7P3	118 aa		3.65	□□□□□ -1.82
DENND3-222	ENST00000523530	LCE1C	Q5T751	118 aa		3.59	□□□□□ -1.84
DENND3-222	ENST00000523530	KRTAP5-11	Q6L8G4	156 aa		3.59	□□□□□ -1.84
DENND3-222	ENST00000523530	AHNAK	Q09666	5890 aa	Known RBP	3.59	□□□□□ -1.84
DENND3-222	ENST00000523530	PRM1	P04553	51 aa		3.51	□□□□□ -1.85
DENND3-222	ENST00000523530	MUC5AC	P98088	5654 aa		3.51	□□□□□ -1.85
DENND3-222	ENST00000523530	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.48	□□□□□ -1.85
DENND3-222	ENST00000523530	KRTAP4-4	Q9BYR3	166 aa		3.36	□□□□□ -1.87
DENND3-222	ENST00000523530	KRTAP21-2	Q3LI59	83 aa		3.14	□□□□□ -1.91
DENND3-222	ENST00000523530	LCE1F	Q5T754	118 aa		2.89	□□□□□ -1.95
DENND3-222	ENST00000523530	PHGR1	C9JFL3	82 aa		2.72	□□□□□ -1.97
DENND3-222	ENST00000523530	MUC19	Q7Z5P9	8384 aa		2.37	□□□□□ -2.03
DENND3-222	ENST00000523530	KRTAP21-1	Q3LI58	79 aa		2.1	□□□□□ -2.07
DENND3-222	ENST00000523530	MUC16	Q8WXI7	14507 aa		1.74	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 74.4 ms