RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 KRTAP9-6A0A140TA67 174 aa7.19□□□□□ -1.26
SQLE-206ENST00000523430 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
SQLE-206ENST00000523430 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
SQLE-206ENST00000523430 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
SQLE-206ENST00000523430 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.07□□□□□ -1.28
SQLE-206ENST00000523430 MT1GP13640 62 aa7.07□□□□□ -1.28
SQLE-206ENST00000523430 MT1MQ8N339 61 aa7.07□□□□□ -1.28
SQLE-206ENST00000523430 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
SQLE-206ENST00000523430 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
SQLE-206ENST00000523430 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.28
SQLE-206ENST00000523430 MDN1Q9NU22 5596 aa6.98□□□□□ -1.29
SQLE-206ENST00000523430 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
SQLE-206ENST00000523430 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
SQLE-206ENST00000523430 SPRR2EP22531 72 aa6.86□□□□□ -1.31
SQLE-206ENST00000523430 SPRR2BP35325 72 aa6.86□□□□□ -1.31
SQLE-206ENST00000523430 SPRR2AP35326 72 aa6.86□□□□□ -1.31
SQLE-206ENST00000523430 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
SQLE-206ENST00000523430 DSTQ03001 7570 aaKnown RBP6.71□□□□□ -1.34
SQLE-206ENST00000523430 H3BS24 57 aa6.62□□□□□ -1.35
SQLE-206ENST00000523430 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
SQLE-206ENST00000523430 SPRR2DP22532 72 aa6.6□□□□□ -1.35
SQLE-206ENST00000523430 NEBP20929 6669 aa6.54□□□□□ -1.36
SQLE-206ENST00000523430 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
SQLE-206ENST00000523430 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
SQLE-206ENST00000523430 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
SQLE-206ENST00000523430 KRTAP5-5Q701N2 237 aaPredicted RBP6.36□□□□□ -1.39
SQLE-206ENST00000523430 A0A0A0MQY5 61 aa6.33□□□□□ -1.4
SQLE-206ENST00000523430 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
SQLE-206ENST00000523430 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
SQLE-206ENST00000523430 MT1AP04731 61 aa6.24□□□□□ -1.41
SQLE-206ENST00000523430 SYNE1Q8NF91 8797 aaKnown RBP6.06□□□□□ -1.44
SQLE-206ENST00000523430 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
SQLE-206ENST00000523430 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
SQLE-206ENST00000523430 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
SQLE-206ENST00000523430 INE1O15225 51 aa5.9□□□□□ -1.46
SQLE-206ENST00000523430 KRTAP2-2Q9BYT5 123 aa5.87□□□□□ -1.47
SQLE-206ENST00000523430 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
SQLE-206ENST00000523430 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
SQLE-206ENST00000523430 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
SQLE-206ENST00000523430 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
SQLE-206ENST00000523430 MT4P47944 62 aa5.77□□□□□ -1.49
SQLE-206ENST00000523430 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
SQLE-206ENST00000523430 MT3P25713 68 aa5.62□□□□□ -1.51
SQLE-206ENST00000523430 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
SQLE-206ENST00000523430 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
SQLE-206ENST00000523430 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
SQLE-206ENST00000523430 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
SQLE-206ENST00000523430 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
SQLE-206ENST00000523430 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
SQLE-206ENST00000523430 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SQLE-206ENST00000523430 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
SQLE-206ENST00000523430 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
SQLE-206ENST00000523430 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
SQLE-206ENST00000523430 PRM1P04553 51 aa4.82□□□□□ -1.64
SQLE-206ENST00000523430 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
SQLE-206ENST00000523430 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
SQLE-206ENST00000523430 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
SQLE-206ENST00000523430 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
SQLE-206ENST00000523430 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
SQLE-206ENST00000523430 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
SQLE-206ENST00000523430 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
SQLE-206ENST00000523430 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
SQLE-206ENST00000523430 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
SQLE-206ENST00000523430 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
SQLE-206ENST00000523430 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
SQLE-206ENST00000523430 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
SQLE-206ENST00000523430 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
SQLE-206ENST00000523430 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SQLE-206ENST00000523430 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
SQLE-206ENST00000523430 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
SQLE-206ENST00000523430 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
SQLE-206ENST00000523430 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SQLE-206ENST00000523430 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SQLE-206ENST00000523430 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
SQLE-206ENST00000523430 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SQLE-206ENST00000523430 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
SQLE-206ENST00000523430 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms