RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 LUZP6Q538Z0 58 aa6.09□□□□□ -1.43
CTNNA1-236ENST00000522792 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
CTNNA1-236ENST00000522792 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
CTNNA1-236ENST00000522792 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
CTNNA1-236ENST00000522792 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-236ENST00000522792 KMT2DO14686 5537 aa5.95□□□□□ -1.46
CTNNA1-236ENST00000522792 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
CTNNA1-236ENST00000522792 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
CTNNA1-236ENST00000522792 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
CTNNA1-236ENST00000522792 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
CTNNA1-236ENST00000522792 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-236ENST00000522792 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
CTNNA1-236ENST00000522792 MT1EP04732 61 aa5.61□□□□□ -1.51
CTNNA1-236ENST00000522792 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-236ENST00000522792 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
CTNNA1-236ENST00000522792 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CTNNA1-236ENST00000522792 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
CTNNA1-236ENST00000522792 MT1LQ93083 61 aa5.5□□□□□ -1.53
CTNNA1-236ENST00000522792 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
CTNNA1-236ENST00000522792 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
CTNNA1-236ENST00000522792 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
CTNNA1-236ENST00000522792 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
CTNNA1-236ENST00000522792 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
CTNNA1-236ENST00000522792 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
CTNNA1-236ENST00000522792 MT1GP13640 62 aa5.31□□□□□ -1.56
CTNNA1-236ENST00000522792 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
CTNNA1-236ENST00000522792 INE1O15225 51 aa5.29□□□□□ -1.56
CTNNA1-236ENST00000522792 MT1MQ8N339 61 aa5.29□□□□□ -1.56
CTNNA1-236ENST00000522792 SPRR2EP22531 72 aa5.26□□□□□ -1.57
CTNNA1-236ENST00000522792 SPRR2BP35325 72 aa5.26□□□□□ -1.57
CTNNA1-236ENST00000522792 SPRR2AP35326 72 aa5.26□□□□□ -1.57
CTNNA1-236ENST00000522792 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
CTNNA1-236ENST00000522792 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
CTNNA1-236ENST00000522792 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
CTNNA1-236ENST00000522792 NEBP20929 6669 aa5.06□□□□□ -1.6
CTNNA1-236ENST00000522792 SPRR2DP22532 72 aa5.06□□□□□ -1.6
CTNNA1-236ENST00000522792 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
CTNNA1-236ENST00000522792 MT3P25713 68 aa4.9□□□□□ -1.63
CTNNA1-236ENST00000522792 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-236ENST00000522792 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
CTNNA1-236ENST00000522792 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
CTNNA1-236ENST00000522792 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
CTNNA1-236ENST00000522792 MT1AP04731 61 aa4.65□□□□□ -1.66
CTNNA1-236ENST00000522792 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.66
CTNNA1-236ENST00000522792 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
CTNNA1-236ENST00000522792 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-236ENST00000522792 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
CTNNA1-236ENST00000522792 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
CTNNA1-236ENST00000522792 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
CTNNA1-236ENST00000522792 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
CTNNA1-236ENST00000522792 MT4P47944 62 aa4.43□□□□□ -1.7
CTNNA1-236ENST00000522792 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
CTNNA1-236ENST00000522792 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
CTNNA1-236ENST00000522792 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-236ENST00000522792 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
CTNNA1-236ENST00000522792 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
CTNNA1-236ENST00000522792 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
CTNNA1-236ENST00000522792 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CTNNA1-236ENST00000522792 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
CTNNA1-236ENST00000522792 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
CTNNA1-236ENST00000522792 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
CTNNA1-236ENST00000522792 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
CTNNA1-236ENST00000522792 PRM1P04553 51 aa3.57□□□□□ -1.84
CTNNA1-236ENST00000522792 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
CTNNA1-236ENST00000522792 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
CTNNA1-236ENST00000522792 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
CTNNA1-236ENST00000522792 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
CTNNA1-236ENST00000522792 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
CTNNA1-236ENST00000522792 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
CTNNA1-236ENST00000522792 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
CTNNA1-236ENST00000522792 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
CTNNA1-236ENST00000522792 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
CTNNA1-236ENST00000522792 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
CTNNA1-236ENST00000522792 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
CTNNA1-236ENST00000522792 PHGR1C9JFL3 82 aa2.58□□□□□ -2
CTNNA1-236ENST00000522792 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CTNNA1-236ENST00000522792 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CTNNA1-236ENST00000522792 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 92.4 ms