RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TNP1P09430 55 aa6.09□□□□□ -1.43
PABPC1-221ENST00000522720 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
PABPC1-221ENST00000522720 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
PABPC1-221ENST00000522720 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
PABPC1-221ENST00000522720 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
PABPC1-221ENST00000522720 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
PABPC1-221ENST00000522720 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
PABPC1-221ENST00000522720 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
PABPC1-221ENST00000522720 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
PABPC1-221ENST00000522720 MT1GP13640 62 aa5.91□□□□□ -1.46
PABPC1-221ENST00000522720 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
PABPC1-221ENST00000522720 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
PABPC1-221ENST00000522720 MT1LQ93083 61 aa5.84□□□□□ -1.47
PABPC1-221ENST00000522720 MT1MQ8N339 61 aa5.79□□□□□ -1.48
PABPC1-221ENST00000522720 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
PABPC1-221ENST00000522720 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
PABPC1-221ENST00000522720 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
PABPC1-221ENST00000522720 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
PABPC1-221ENST00000522720 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
PABPC1-221ENST00000522720 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
PABPC1-221ENST00000522720 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
PABPC1-221ENST00000522720 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
PABPC1-221ENST00000522720 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
PABPC1-221ENST00000522720 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
PABPC1-221ENST00000522720 MT4P47944 62 aa5.45□□□□□ -1.54
PABPC1-221ENST00000522720 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
PABPC1-221ENST00000522720 GPR98Q8WXG9 6306 aa5.43□□□□□ -1.54
PABPC1-221ENST00000522720 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.54
PABPC1-221ENST00000522720 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
PABPC1-221ENST00000522720 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
PABPC1-221ENST00000522720 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-221ENST00000522720 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
PABPC1-221ENST00000522720 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
PABPC1-221ENST00000522720 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
PABPC1-221ENST00000522720 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
PABPC1-221ENST00000522720 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
PABPC1-221ENST00000522720 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
PABPC1-221ENST00000522720 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
PABPC1-221ENST00000522720 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
PABPC1-221ENST00000522720 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
PABPC1-221ENST00000522720 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
PABPC1-221ENST00000522720 MT1AP04731 61 aa4.97□□□□□ -1.61
PABPC1-221ENST00000522720 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
PABPC1-221ENST00000522720 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
PABPC1-221ENST00000522720 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
PABPC1-221ENST00000522720 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
PABPC1-221ENST00000522720 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
PABPC1-221ENST00000522720 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
PABPC1-221ENST00000522720 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
PABPC1-221ENST00000522720 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
PABPC1-221ENST00000522720 MT3P25713 68 aa4.55□□□□□ -1.68
PABPC1-221ENST00000522720 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
PABPC1-221ENST00000522720 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
PABPC1-221ENST00000522720 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
PABPC1-221ENST00000522720 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
PABPC1-221ENST00000522720 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-221ENST00000522720 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
PABPC1-221ENST00000522720 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
PABPC1-221ENST00000522720 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
PABPC1-221ENST00000522720 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
PABPC1-221ENST00000522720 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
PABPC1-221ENST00000522720 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
PABPC1-221ENST00000522720 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
PABPC1-221ENST00000522720 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
PABPC1-221ENST00000522720 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
PABPC1-221ENST00000522720 INE1O15225 51 aa3.7□□□□□ -1.82
PABPC1-221ENST00000522720 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
PABPC1-221ENST00000522720 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
PABPC1-221ENST00000522720 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
PABPC1-221ENST00000522720 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
PABPC1-221ENST00000522720 H3BS24 57 aa3.32□□□□□ -1.88
PABPC1-221ENST00000522720 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
PABPC1-221ENST00000522720 PRM1P04553 51 aa3.1□□□□□ -1.91
PABPC1-221ENST00000522720 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
PABPC1-221ENST00000522720 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
PABPC1-221ENST00000522720 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
PABPC1-221ENST00000522720 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
PABPC1-221ENST00000522720 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 9 ms