RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
PDGFRB-210ENST00000522466 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
PDGFRB-210ENST00000522466 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
PDGFRB-210ENST00000522466 SEC61GP60059 68 aa2.85□□□□□ -1.95
PDGFRB-210ENST00000522466 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
PDGFRB-210ENST00000522466 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
PDGFRB-210ENST00000522466 LINC00208Q96KT6 92 aa2.81□□□□□ -1.96
PDGFRB-210ENST00000522466 TRAV7A0A075B6U4 112 aa2.8□□□□□ -1.96
PDGFRB-210ENST00000522466 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
PDGFRB-210ENST00000522466 MT1LQ93083 61 aa2.8□□□□□ -1.96
PDGFRB-210ENST00000522466 A0A0D9SG42 100 aa2.79□□□□□ -1.96
PDGFRB-210ENST00000522466 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
PDGFRB-210ENST00000522466 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
PDGFRB-210ENST00000522466 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
PDGFRB-210ENST00000522466 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
PDGFRB-210ENST00000522466 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
PDGFRB-210ENST00000522466 H7BZZ5 65 aa2.71□□□□□ -1.98
PDGFRB-210ENST00000522466 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
PDGFRB-210ENST00000522466 MP68P56378 58 aa2.7□□□□□ -1.98
PDGFRB-210ENST00000522466 Q1T7F1 81 aa2.7□□□□□ -1.98
PDGFRB-210ENST00000522466 H3BPC8 53 aa2.67□□□□□ -1.98
PDGFRB-210ENST00000522466 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
PDGFRB-210ENST00000522466 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
PDGFRB-210ENST00000522466 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
PDGFRB-210ENST00000522466 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
PDGFRB-210ENST00000522466 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
PDGFRB-210ENST00000522466 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
PDGFRB-210ENST00000522466 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
PDGFRB-210ENST00000522466 MT3P25713 68 aa2.63□□□□□ -1.99
PDGFRB-210ENST00000522466 OCR1Q9BZK8 76 aa2.63□□□□□ -1.99
PDGFRB-210ENST00000522466 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
PDGFRB-210ENST00000522466 SPANXA2-OT1Q8N9U9 137 aa2.62□□□□□ -1.99
PDGFRB-210ENST00000522466 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
PDGFRB-210ENST00000522466 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
PDGFRB-210ENST00000522466 ACYP2P14621 99 aa2.6□□□□□ -1.99
PDGFRB-210ENST00000522466 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
PDGFRB-210ENST00000522466 CHKB-CPT1BH3BT56 60 aa2.59□□□□□ -1.99
PDGFRB-210ENST00000522466 CDC42SE1Q9NRR8 79 aa2.57□□□□□ -2
PDGFRB-210ENST00000522466 SNURFQ9Y675 71 aa2.56□□□□□ -2
PDGFRB-210ENST00000522466 PRR15LQ9BU68 103 aa2.54□□□□□ -2
PDGFRB-210ENST00000522466 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
PDGFRB-210ENST00000522466 A6NED7 52 aa2.52□□□□□ -2.01
PDGFRB-210ENST00000522466 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
PDGFRB-210ENST00000522466 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
PDGFRB-210ENST00000522466 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
PDGFRB-210ENST00000522466 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
PDGFRB-210ENST00000522466 PSPHP1O15172 72 aa2.48□□□□□ -2.01
PDGFRB-210ENST00000522466 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
PDGFRB-210ENST00000522466 TNP1P09430 55 aa2.47□□□□□ -2.01
PDGFRB-210ENST00000522466 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
PDGFRB-210ENST00000522466 COA5Q86WW8 74 aa2.42□□□□□ -2.02
PDGFRB-210ENST00000522466 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
PDGFRB-210ENST00000522466 UQCR11O14957 56 aa2.41□□□□□ -2.02
PDGFRB-210ENST00000522466 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
PDGFRB-210ENST00000522466 A0A1B0GU33 70 aa2.4□□□□□ -2.03
PDGFRB-210ENST00000522466 A0A1B0GU69 56 aa2.37□□□□□ -2.03
PDGFRB-210ENST00000522466 A8MU10 97 aa2.37□□□□□ -2.03
PDGFRB-210ENST00000522466 K7ERS5 55 aa2.36□□□□□ -2.03
PDGFRB-210ENST00000522466 MT1AP04731 61 aa2.36□□□□□ -2.03
PDGFRB-210ENST00000522466 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
PDGFRB-210ENST00000522466 LCE3CQ5T5A8 94 aa2.36□□□□□ -2.03
PDGFRB-210ENST00000522466 MIR22HGQ0VDD5 57 aa2.34□□□□□ -2.03
PDGFRB-210ENST00000522466 ROMO1P60602 79 aa2.3□□□□□ -2.04
PDGFRB-210ENST00000522466 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
PDGFRB-210ENST00000522466 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
PDGFRB-210ENST00000522466 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
PDGFRB-210ENST00000522466 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
PDGFRB-210ENST00000522466 NDUFAF8A1L188 74 aa2.06□□□□□ -2.08
PDGFRB-210ENST00000522466 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
PDGFRB-210ENST00000522466 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
PDGFRB-210ENST00000522466 INE1O15225 51 aa1.93□□□□□ -2.1
PDGFRB-210ENST00000522466 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
PDGFRB-210ENST00000522466 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
PDGFRB-210ENST00000522466 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
PDGFRB-210ENST00000522466 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
PDGFRB-210ENST00000522466 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
PDGFRB-210ENST00000522466 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
PDGFRB-210ENST00000522466 PRM1P04553 51 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 47 ms